Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ANLIBEON_42 | 90694 | 91494 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| ANLIBEON_46 | 32672 | 33637 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| ANLIBEON_41 | 28905 | 30830 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ANLIBEON_46 | 32672 | 33637 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| ANLIBEON_42 | 90694 | 91494 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| ANLIBEON_41 | 28905 | 30830 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ANLIBEON_46 | 32675 | 33637 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| ANLIBEON_42 | 90697 | 91494 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| ANLIBEON_41 | 28905 | 30827 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ANLIBEON_64 | 107768 | 106188 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ANLIBEON_1 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_2 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_3 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_4 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_5 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_6 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_7 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_8 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_9 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_10 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_11 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_12 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_13 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_14 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_15 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_16 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_17 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_18 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_19 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_20 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_21 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_22 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_23 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_24 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_25 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_26 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_27 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_28 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_29 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_30 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_31 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_33 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_34 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_35 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_36 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_37 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_38 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_39 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_40 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_41 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_42 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_43 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_44 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_45 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_46 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_47 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_48 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_49 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_50 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_51 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_52 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_53 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_54 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_55 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_56 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_57 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_58 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_59 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_60 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_61 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_62 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_63 | 1.0 | 0.0 | 1.0 |
| ANLIBEON_64 | 0.0 | 1.0 | 0.0 |
| ANLIBEON_65 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)