Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CLJNFOJG_18 | 71251 | 72831 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CLJNFOJG_1 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_2 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_3 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_5 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_6 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_7 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_8 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_9 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_10 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_11 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_12 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_13 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_14 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_15 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_16 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_17 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_18 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_19 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_20 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_21 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_22 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_23 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_24 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_25 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_26 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_27 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_28 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_29 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_30 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_31 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_32 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_33 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_34 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_35 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_36 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_37 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_38 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_39 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_40 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_41 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_42 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_43 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_44 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_45 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_46 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_47 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_48 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_49 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_50 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_51 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_52 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_53 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_54 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_55 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_56 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_57 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_58 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_59 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_60 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_61 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_62 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_63 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_64 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_65 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_66 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_67 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_68 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_69 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_70 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_71 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_72 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_73 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_74 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_75 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_76 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_77 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_78 | 0.0 | 1.0 | 0.0 |
| CLJNFOJG_79 | 1.0 | 0.0 | 1.0 |
| CLJNFOJG_80 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CLJNFOJG_26 | 9921 | 11168 | False | Unknown | |
| CLJNFOJG_32 | 8905 | 16607 | False | Unknown | VOG4573, |
| CLJNFOJG_32 | 124134 | 134797 | False | Myoviridae | VOG5684, |
| CLJNFOJG_34 | 162948 | 178817 | False | Siphoviridae | VOG11071, |
| CLJNFOJG_68 | 58400 | 65561 | False | Myoviridae | VOG11032, |
Phigaro v2.4.0 (Database: Jan. 2024 release)