Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KNJNJPPM_28 | 128446 | 130026 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.45 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KNJNJPPM_1 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_2 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_3 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_4 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_5 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_6 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_7 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_8 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_9 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_10 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_11 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_12 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_13 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_15 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_16 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_17 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_18 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_19 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_20 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_21 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_22 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_23 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_24 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_25 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_26 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_27 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_28 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_29 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_30 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_31 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_32 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_33 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_34 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_35 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_36 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_37 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_38 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_39 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_40 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_41 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_42 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_43 | 1.0 | 0.0 | 1.0 |
| KNJNJPPM_44 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_45 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_46 | 0.0 | 1.0 | 0.0 |
| KNJNJPPM_47 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KNJNJPPM_3 | 12679 | 20811 | True | Siphoviridae | VOG6282, |
Phigaro v2.4.0 (Database: Jan. 2024 release)