Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFGALMNK_14 | 65877 | 66371 | nimF | ARO:3007108 | nimF | 98.68 | 108.61 | AJ515145.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BFGALMNK_14 | 65886 | 66371 | nimF | Metronidazole | 96.91 | 98.17 | AJ515145 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFGALMNK_14 | 65889 | 66371 | nimG | 5-nitroimidazole reductase NimG | BLASTX | 80.75 | 98.17 | WP_087312253.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BFGALMNK_28 | 140579 | 138999 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BFGALMNK_1 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_2 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_3 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_4 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_5 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_6 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_7 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_8 | 1.0 | 0.0 | 1.0 |
| BFGALMNK_9 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_10 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_11 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_12 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_13 | 1.0 | 0.0 | 1.0 |
| BFGALMNK_14 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_15 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_16 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_17 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_18 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_19 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_20 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_21 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_22 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_24 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_25 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_26 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_27 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_28 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_29 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_30 | 1.0 | 0.0 | 1.0 |
| BFGALMNK_31 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_32 | 1.0 | 0.0 | 1.0 |
| BFGALMNK_33 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_34 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_35 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_36 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_37 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_38 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_39 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_40 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_41 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_42 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_43 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_44 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_45 | 1.0 | 0.0 | 1.0 |
| BFGALMNK_46 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_47 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_48 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_49 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_50 | 0.0 | 1.0 | 0.0 |
| BFGALMNK_51 | 1.0 | 0.0 | 1.0 |
| BFGALMNK_52 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)