Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCBGJHOB_7 | 19738 | 21318 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCBGJHOB_1 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_2 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_3 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_4 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_5 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_6 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_7 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_8 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_9 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_10 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_11 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_12 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_13 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_14 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_15 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_16 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_17 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_18 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_19 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_20 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_21 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_22 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_23 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_24 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_25 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_26 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_27 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_28 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_29 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_30 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_31 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_32 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_33 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_34 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_35 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_36 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_37 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_38 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_39 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_40 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_41 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_42 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_43 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_44 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_45 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_46 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_47 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_48 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_49 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_50 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_51 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_52 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_53 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_54 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_55 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_56 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_57 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_58 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_59 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_60 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_61 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_62 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_63 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_64 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_65 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_66 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_67 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_68 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_69 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_70 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_71 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_72 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_73 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_74 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_75 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_76 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_77 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_78 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_79 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_80 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_81 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_82 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_83 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_84 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_85 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_86 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_87 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_88 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_89 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_90 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_91 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_93 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_94 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_95 | 1.0 | 0.0 | 1.0 |
| KCBGJHOB_96 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_97 | 0.0 | 1.0 | 0.0 |
| KCBGJHOB_98 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCBGJHOB_24 | 6056 | 21913 | False | Siphoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)