Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OIAICDBB_54 | 16296 | 17876 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OIAICDBB_1 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_2 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_3 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_4 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_5 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_6 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_7 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_8 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_9 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_10 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_11 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_12 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_13 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_15 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_16 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_17 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_18 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_19 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_20 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_21 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_22 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_23 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_24 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_25 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_26 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_27 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_28 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_29 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_30 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_31 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_32 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_33 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_34 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_35 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_36 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_37 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_38 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_39 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_40 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_41 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_42 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_43 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_44 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_45 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_46 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_47 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_48 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_49 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_50 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_51 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_52 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_53 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_54 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_55 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_56 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_57 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_58 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_59 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_60 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_61 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_62 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_63 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_64 | 1.0 | 0.0 | 1.0 |
| OIAICDBB_65 | 0.0 | 1.0 | 0.0 |
| OIAICDBB_66 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)