Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDDGLBAN_60 | 103381 | 104586 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JDDGLBAN_29 | 3373 | 4590 | mef(A) | Erythromycin, Azithromycin | 95.07 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDDGLBAN_60 | 104611 | 105120 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| JDDGLBAN_60 | 103381 | 104583 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| JDDGLBAN_29 | 3373 | 4593 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JDDGLBAN_56 | 139253 | 137673 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JDDGLBAN_1 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_2 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_3 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_4 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_5 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_6 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_7 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_8 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_9 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_10 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_11 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_12 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_13 | 1.0 | 0.0 | 1.0 |
| JDDGLBAN_14 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_15 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_16 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_17 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_18 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_19 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_20 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_21 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_22 | 1.0 | 0.0 | 1.0 |
| JDDGLBAN_23 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_24 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_25 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_26 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_27 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_28 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_29 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_30 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_31 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_32 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_33 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_34 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_35 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_36 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_37 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_38 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_39 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_40 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_41 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_42 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_43 | 1.0 | 0.0 | 1.0 |
| JDDGLBAN_44 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_45 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_46 | 1.0 | 0.0 | 1.0 |
| JDDGLBAN_47 | 1.0 | 0.0 | 1.0 |
| JDDGLBAN_48 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_49 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_50 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_51 | 1.0 | 0.0 | 1.0 |
| JDDGLBAN_52 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_53 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_54 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_55 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_56 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_57 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_58 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_59 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_60 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_61 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_62 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_63 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_64 | 0.0 | 1.0 | 0.0 |
| JDDGLBAN_65 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)