Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPKNKBCO_101 | 53556 | 54458 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JPKNKBCO_101 | 53556 | 54458 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPKNKBCO_101 | 53559 | 54458 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JPKNKBCO_1 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_2 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_3 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_4 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_5 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_6 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_7 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_8 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_9 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_10 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_11 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_12 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_13 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_14 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_15 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_16 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_17 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_18 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_19 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_20 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_21 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_22 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_23 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_24 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_25 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_26 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_27 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_28 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_29 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_30 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_31 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_32 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_33 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_34 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_35 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_36 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_37 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_38 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_39 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_40 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_41 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_42 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_43 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_44 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_45 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_46 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_47 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_48 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_49 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_50 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_51 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_52 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_53 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_54 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_55 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_56 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_57 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_58 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_59 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_60 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_61 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_62 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_63 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_64 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_65 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_66 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_67 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_68 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_69 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_70 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_71 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_72 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_73 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_74 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_75 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_76 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_77 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_78 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_79 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_80 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_81 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_82 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_83 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_84 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_85 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_86 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_87 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_88 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_89 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_90 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_91 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_92 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_93 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_94 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_95 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_96 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_97 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_98 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_99 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_100 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_101 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_102 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_103 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_104 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_105 | 1.0 | 0.0 | 1.0 |
| JPKNKBCO_106 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_107 | 0.0 | 1.0 | 0.0 |
| JPKNKBCO_108 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JPKNKBCO_38 | 24070 | 32029 | False | Siphoviridae | VOG4556, |
| JPKNKBCO_72 | 20799 | 30315 | False | Siphoviridae | VOG3349, |
Phigaro v2.4.0 (Database: Jan. 2024 release)