Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KJJCHLMJ_93 | 20865 | 22070 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| KJJCHLMJ_54 | 10039 | 10929 | CblA-1 | ARO:3002999 | CblA-1 | 96.28 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KJJCHLMJ_93 | 22095 | 22604 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| KJJCHLMJ_93 | 20865 | 22067 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| KJJCHLMJ_54 | 10042 | 10929 | cblA | CblA family class A beta-lactamase | BLASTX | 96.28 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KJJCHLMJ_1 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_2 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_3 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_4 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_5 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_6 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_7 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_8 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_9 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_10 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_11 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_12 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_13 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_14 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_15 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_16 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_17 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_18 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_19 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_20 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_21 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_22 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_23 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_24 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_25 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_26 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_27 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_28 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_29 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_30 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_31 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_32 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_33 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_34 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_35 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_36 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_37 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_38 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_39 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_40 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_41 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_42 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_43 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_44 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_45 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_46 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_47 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_48 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_49 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_50 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_51 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_52 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_53 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_54 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_55 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_56 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_57 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_58 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_59 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_60 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_61 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_62 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_63 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_64 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_65 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_66 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_67 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_68 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_69 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_70 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_71 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_72 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_73 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_74 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_75 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_76 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_77 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_78 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_79 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_80 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_81 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_82 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_83 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_84 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_85 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_86 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_87 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_88 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_89 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_90 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_91 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_92 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_93 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_94 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_95 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_96 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_97 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_98 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_99 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_100 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_101 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_102 | 1.0 | 0.0 | 1.0 |
| KJJCHLMJ_103 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_104 | 0.0 | 1.0 | 0.0 |
| KJJCHLMJ_105 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KJJCHLMJ_52 | 43527 | 64331 | True | Siphoviridae | VOG2142, |
Phigaro v2.4.0 (Database: Jan. 2024 release)