Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HGOAKHEN_3 | 116789 | 117493 | WalR | 1.15e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| HGOAKHEN_5 | 44479 | 44673 | CspR | 8.49e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| HGOAKHEN_5 | 44479 | 44676 | CspA | 1.30e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HGOAKHEN_42 | 9316 | 9944 | rep38 | 630 / 903 | 88.41 | CP005943 |
| HGOAKHEN_43 | 250 | 825 | rep28 | 577 / 936 | 83.88 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HGOAKHEN_1 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_2 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_3 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_4 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_5 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_6 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_7 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_8 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_9 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_10 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_11 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_12 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_13 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_14 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_15 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_16 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_17 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_18 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_19 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_20 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_21 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_22 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_23 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_24 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_25 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_26 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_27 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_28 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_29 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_30 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_31 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_32 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_33 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_34 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_35 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_36 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_37 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_38 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_39 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_40 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_41 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_42 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_43 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_44 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_45 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_46 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_47 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_48 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_49 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_50 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_51 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_52 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_53 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_54 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_55 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_56 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_57 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_58 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_59 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_60 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_61 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_62 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_63 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_64 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_65 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_66 | 0.0 | 1.0 | 0.0 |
| HGOAKHEN_67 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_69 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_70 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_71 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_72 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_73 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_74 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_75 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_76 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_77 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_78 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_79 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_80 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_81 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_82 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_84 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_86 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_87 | 1.0 | 0.0 | 1.0 |
| HGOAKHEN_88 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HGOAKHEN_1 | 268445 | 274698 | False | Unknown | VOG0044, VOG6140, VOG6005, VOG0327, VOG4606, VOG6545, VOG3777 |
| HGOAKHEN_17 | 2152 | 27082 | False | Siphoviridae | VOG4856, VOG4619, VOG4619, VOG0801, VOG0701, VOG9763, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692, VOG0691, VOG3699, VOG5616, VOG0198, VOG3643, VOG0044, VOG0044, VOG4571, VOG4693 |
| HGOAKHEN_17 | 40860 | 52095 | False | Siphoviridae | VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
| HGOAKHEN_22 | 32824 | 37167 | False | Unknown | VOG0321, VOG4548, VOG0322, VOG6545 |
Phigaro v2.4.0 (Database: Jan. 2024 release)