Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HEHGKEEJ_49 | 3188 | 4429 | tet(W) | ARO:3000194 | tet(W) | 97.78 | 64.63 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HEHGKEEJ_49 | 3188 | 5109 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.01 | 100.00 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HEHGKEEJ_49 | 3188 | 4489 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | INTERNAL_STOP | 94.51 | 67.61 | WP_000691721.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HEHGKEEJ_90 | 68488 | 68294 | CspA | 1.59e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HEHGKEEJ_5 | 6311 | 7087 | rep30 | 777 / 777 | 100.00 | CP002845 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HEHGKEEJ_1 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_2 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_3 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_4 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_5 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_6 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_7 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_8 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_9 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_10 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_11 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_12 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_13 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_14 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_15 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_16 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_17 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_18 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_19 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_20 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_21 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_22 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_23 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_24 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_25 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_26 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_27 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_28 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_29 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_30 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_31 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_32 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_33 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_34 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_35 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_36 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_37 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_38 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_39 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_40 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_41 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_42 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_43 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_44 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_45 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_46 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_47 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_48 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_49 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_50 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_51 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_52 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_53 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_54 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_55 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_56 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_57 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_58 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_59 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_60 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_61 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_62 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_63 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_64 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_65 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_66 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_67 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_68 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_69 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_70 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_71 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_72 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_73 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_74 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_75 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_76 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_77 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_78 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_79 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_80 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_81 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_82 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_83 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_84 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_85 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_86 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_87 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_88 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_89 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_90 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_91 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_92 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_93 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_94 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_95 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_96 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_97 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_98 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_99 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_100 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_101 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_102 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_103 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_104 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_105 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_106 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_107 | 1.0 | 0.0 | 1.0 |
| HEHGKEEJ_108 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_109 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_110 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_111 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_112 | 0.0 | 1.0 | 0.0 |
| HEHGKEEJ_113 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HEHGKEEJ_33 | 2557 | 11674 | False | Siphoviridae | VOG4662, VOG3304, VOG0862, VOG9667, VOG7581, VOG4552, VOG2228, VOG10172, VOG2228, VOG4925, VOG7341, VOG1309, VOG0186, VOG9438 |
| HEHGKEEJ_33 | 19374 | 43196 | False | Siphoviridae | VOG9437, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG4687, VOG5601, VOG10593, VOG4334, VOG7896, VOG8917 |
| HEHGKEEJ_78 | 7918 | 32711 | False | Siphoviridae | VOG0136, VOG1637, VOG4856, VOG10972, VOG0801, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841, VOG4693, VOG1345, VOG0822, VOG4570 |
Phigaro v2.4.0 (Database: Jan. 2024 release)