Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BOOGOFLJ_29 | 16645 | 17349 | WalR | 2.82e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BOOGOFLJ_33 | 17898 | 17701 | CspR | 5.05e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BOOGOFLJ_40 | 1110 | 2134 | repUS74 | 1025 / 1062 | 88.29 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BOOGOFLJ_1 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_2 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_3 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_4 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_5 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_6 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_7 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_8 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_9 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_10 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_11 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_12 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_13 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_14 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_15 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_16 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_17 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_18 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_19 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_20 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_21 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_22 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_23 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_24 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_25 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_26 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_27 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_28 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_29 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_30 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_31 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_32 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_33 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_34 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_35 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_36 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_37 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_38 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_39 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_40 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_41 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_42 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_43 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_44 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_45 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_46 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_47 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_48 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_49 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_50 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_51 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_52 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_53 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_54 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_55 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_56 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_57 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_58 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_59 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_60 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_61 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_62 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_63 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_64 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_65 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_66 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_67 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_68 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_69 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_70 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_71 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_72 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_73 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_74 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_75 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_76 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_77 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_78 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_79 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_80 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_81 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_82 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_83 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_84 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_85 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_86 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_88 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_89 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_90 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_92 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_93 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_94 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_95 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_96 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_97 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_98 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_99 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_100 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_101 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_102 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_103 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_104 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_105 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_106 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_107 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_108 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_109 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_110 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_111 | 0.0 | 1.0 | 0.0 |
| BOOGOFLJ_112 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_113 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_114 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_116 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_118 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_119 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_120 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_121 | 1.0 | 0.0 | 1.0 |
| BOOGOFLJ_122 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BOOGOFLJ_3 | 2233 | 35531 | False | Siphoviridae | VOG0707, VOG0181, VOG10867, VOG3642, VOG4799, VOG0025, VOG7735, VOG4813, VOG6140, VOG0198, VOG4602, VOG4570, VOG4549, VOG9303, VOG1345, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0703, VOG4918, VOG3795 |
Phigaro v2.4.0 (Database: Jan. 2024 release)