Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 8 | 8.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FLKJMJPB_22 | 33055 | 31904 | tufA | 0.0 | elongation factor Tu | 85.94 | 97.21 | AHM69299 |
| FLKJMJPB_52 | 4466 | 5335 | pdxS | 1.55e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| FLKJMJPB_63 | 33954 | 34730 | CodY | 3.02e-127 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FLKJMJPB_24 | 833 | 1402 | ClpP | 7.43e-105 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| FLKJMJPB_91 | 7187 | 7579 | spxA1 | 2.05e-73 | redox-responsive transcription factor | 88.55 | 100.00 | AAF21893 |
| FLKJMJPB_91 | 7187 | 7579 | spx | 4.44e-68 | essential gene which is a thiol/oxidative stress sensor | 80.92 | 100.00 | BAB57159 |
| FLKJMJPB_50 | 17525 | 17767 | SpoVG | 7.74e-40 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| FLKJMJPB_197 | 287 | 484 | CspA | 2.76e-33 | cold shock protein | 87.88 | 100.00 | CAA62903 |
| FLKJMJPB_197 | 287 | 481 | CspR | 5.87e-30 | cold shock protein | 83.08 | 98.48 | AAO82613 |
| FLKJMJPB_23 | 24642 | 24448 | CspD | 7.03e-30 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| FLKJMJPB_23 | 24642 | 24445 | CspB | 4.72e-29 | cold shock protein | 80.30 | 100.00 | CAD00094 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FLKJMJPB_1 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_2 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_3 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_4 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_5 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_6 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_7 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_10 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_11 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_12 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_13 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_15 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_16 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_18 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_19 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_21 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_22 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_23 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_24 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_25 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_26 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_27 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_28 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_29 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_30 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_31 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_32 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_33 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_34 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_35 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_36 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_37 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_38 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_39 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_40 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_41 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_42 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_43 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_44 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_45 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_46 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_47 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_48 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_49 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_50 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_51 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_52 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_53 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_54 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_55 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_56 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_57 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_58 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_59 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_60 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_61 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_62 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_63 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_64 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_65 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_66 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_67 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_68 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_69 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_70 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_71 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_72 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_73 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_74 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_75 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_76 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_77 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_78 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_80 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_81 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_82 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_83 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_84 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_85 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_86 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_87 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_88 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_89 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_90 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_91 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_92 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_94 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_95 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_96 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_98 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_99 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_100 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_101 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_102 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_103 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_104 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_105 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_106 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_108 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_109 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_111 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_112 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_113 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_114 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_115 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_116 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_117 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_118 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_119 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_120 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_121 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_123 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_124 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_125 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_126 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_127 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_128 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_129 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_130 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_131 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_132 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_133 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_134 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_135 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_136 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_138 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_139 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_140 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_141 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_142 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_143 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_144 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_146 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_148 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_150 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_151 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_152 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_153 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_154 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_155 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_156 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_157 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_158 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_160 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_161 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_162 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_163 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_164 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_165 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_167 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_168 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_169 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_171 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_172 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_173 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_174 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_175 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_176 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_177 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_178 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_179 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_180 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_181 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_182 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_183 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_184 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_185 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_186 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_189 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_190 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_191 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_192 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_194 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_196 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_197 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_198 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_200 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_201 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_205 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_208 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_209 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_210 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_211 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_212 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_213 | 1.0 | 0.0 | 1.0 |
| FLKJMJPB_215 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_225 | 0.0 | 1.0 | 0.0 |
| FLKJMJPB_226 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)