Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 8 | 8.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DIMOLNBN_51 | 41769 | 40618 | tufA | 0.0 | elongation factor Tu | 86.72 | 97.21 | AHM69299 |
| DIMOLNBN_8 | 8669 | 7800 | pdxS | 9.58e-153 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DIMOLNBN_29 | 65772 | 66548 | CodY | 2.10e-127 | nutrient-responsive regulator | 81.47 | 100.00 | ACJ80679 |
| DIMOLNBN_29 | 65772 | 66548 | codY | 5.08e-124 | global regulator and isoleucine sensor | 80.31 | 100.00 | ASW39076 |
| DIMOLNBN_3 | 132942 | 133511 | ClpP | 6.50e-104 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| DIMOLNBN_3 | 38542 | 38150 | spxA1 | 1.14e-72 | redox-responsive transcription factor | 88.55 | 100.00 | AAF21893 |
| DIMOLNBN_3 | 38542 | 38150 | spx | 2.46e-67 | essential gene which is a thiol/oxidative stress sensor | 80.92 | 100.00 | BAB57159 |
| DIMOLNBN_20 | 18172 | 18414 | SpoVG | 7.36e-40 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| DIMOLNBN_15 | 47348 | 47151 | CspA | 5.81e-31 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| DIMOLNBN_78 | 8129 | 8323 | CspD | 5.08e-30 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| DIMOLNBN_78 | 8129 | 8326 | CspB | 3.42e-29 | cold shock protein | 80.30 | 100.00 | CAD00094 |
| DIMOLNBN_15 | 47348 | 47154 | CspR | 1.08e-27 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DIMOLNBN_1 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_2 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_3 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_4 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_5 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_6 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_7 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_8 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_10 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_11 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_12 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_13 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_14 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_15 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_16 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_17 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_18 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_19 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_20 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_21 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_22 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_23 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_24 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_25 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_26 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_27 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_28 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_29 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_30 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_31 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_32 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_33 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_34 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_35 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_36 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_37 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_38 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_39 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_40 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_41 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_42 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_43 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_44 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_45 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_46 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_47 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_48 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_49 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_50 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_51 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_52 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_53 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_54 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_55 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_56 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_58 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_59 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_60 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_61 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_62 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_63 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_64 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_65 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_66 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_67 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_68 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_69 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_70 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_71 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_72 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_73 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_74 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_75 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_77 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_78 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_79 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_80 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_81 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_82 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_83 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_84 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_85 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_88 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_89 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_90 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_91 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_92 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_94 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_95 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_96 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_97 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_98 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_99 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_100 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_101 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_102 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_103 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_104 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_105 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_107 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_108 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_110 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_111 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_112 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_113 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_114 | 1.0 | 0.0 | 1.0 |
| DIMOLNBN_115 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_116 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_117 | 0.0 | 1.0 | 0.0 |
| DIMOLNBN_119 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)