Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BOBNJIFL_6 | 49665 | 49862 | CspA | 8.56e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| BOBNJIFL_6 | 49665 | 49859 | CspR | 1.55e-28 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BOBNJIFL_1 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_2 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_3 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_4 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_5 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_6 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_7 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_8 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_9 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_10 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_11 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_12 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_13 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_14 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_15 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_16 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_17 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_18 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_19 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_20 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_21 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_22 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_23 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_24 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_25 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_26 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_27 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_28 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_29 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_30 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_31 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_32 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_33 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_34 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_35 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_36 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_37 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_38 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_39 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_40 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_41 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_42 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_43 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_44 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_45 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_46 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_47 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_48 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_49 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_50 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_51 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_52 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_53 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_54 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_55 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_56 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_57 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_58 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_59 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_60 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_61 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_62 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_63 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_64 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_65 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_66 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_67 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_68 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_70 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_71 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_72 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_73 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_74 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_75 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_78 | 0.0 | 1.0 | 0.0 |
| BOBNJIFL_81 | 1.0 | 0.0 | 1.0 |
| BOBNJIFL_82 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BOBNJIFL_1 | 63652 | 97290 | False | Siphoviridae | VOG0703, VOG1637, VOG4841, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG3594, VOG9601, VOG0198, VOG4799, VOG0226, VOG0186, VOG1309, VOG2228, VOG4552 |
| BOBNJIFL_3 | 6168 | 16110 | False | Myoviridae | VOG0226, VOG0205, VOG0384, VOG0382, VOG0083, VOG5235 |
Phigaro v2.4.0 (Database: Jan. 2024 release)