Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| POOEOOJL_38 | 2031 | 2228 | CspA | 1.97e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| POOEOOJL_38 | 2031 | 2225 | CspR | 3.57e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| POOEOOJL_64 | 1453 | 2487 | rep38 | 1045 / 1104 | 85.17 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| POOEOOJL_1 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_2 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_3 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_4 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_5 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_6 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_7 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_8 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_9 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_10 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_11 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_12 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_13 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_14 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_15 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_16 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_17 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_18 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_19 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_20 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_21 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_22 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_23 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_24 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_25 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_26 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_27 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_28 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_29 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_30 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_31 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_32 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_33 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_34 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_35 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_36 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_37 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_38 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_39 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_40 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_41 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_42 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_43 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_44 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_45 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_46 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_47 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_48 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_49 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_50 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_51 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_52 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_53 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_54 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_55 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_56 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_57 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_58 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_59 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_60 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_61 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_62 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_63 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_64 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_65 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_66 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_67 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_68 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_70 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_71 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_72 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_73 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_74 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_75 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_76 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_77 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_78 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_79 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_80 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_81 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_83 | 0.0 | 1.0 | 0.0 |
| POOEOOJL_84 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_85 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_86 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_87 | 1.0 | 0.0 | 1.0 |
| POOEOOJL_90 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| POOEOOJL_4 | 15541 | 34697 | False | Myoviridae / Siphoviridae | VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295, VOG1176 |
| POOEOOJL_13 | 12419 | 28635 | False | Siphoviridae | VOG4999, VOG4632, VOG0650, VOG2687, VOG9667, VOG0275, VOG1355, VOG4624, VOG1292 |
Phigaro v2.4.0 (Database: Jan. 2024 release)