Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BGFOCPPG_7 | 13983 | 13786 | CspA | 8.55e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| BGFOCPPG_7 | 13983 | 13789 | CspR | 1.55e-28 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BGFOCPPG_1 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_2 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_3 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_4 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_5 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_6 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_7 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_8 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_9 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_10 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_11 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_12 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_13 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_14 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_15 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_16 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_17 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_18 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_19 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_20 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_21 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_22 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_23 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_24 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_25 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_26 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_27 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_28 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_29 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_30 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_31 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_32 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_33 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_34 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_35 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_36 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_37 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_38 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_39 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_40 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_41 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_42 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_43 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_44 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_45 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_46 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_47 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_48 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_49 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_50 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_51 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_52 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_53 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_54 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_55 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_56 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_57 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_58 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_59 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_60 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_61 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_63 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_64 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_65 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_66 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_67 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_68 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_69 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_70 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_72 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_73 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_74 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_75 | 0.0 | 1.0 | 0.0 |
| BGFOCPPG_76 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_77 | 1.0 | 0.0 | 1.0 |
| BGFOCPPG_78 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BGFOCPPG_1 | 71940 | 106974 | False | Siphoviridae | VOG7424, VOG0862, VOG9667, VOG7581, VOG4552, VOG2228, VOG3941, VOG1309, VOG0186, VOG0226, VOG4566, VOG0198, VOG3477, VOG4581, VOG1886, VOG4556, VOG4568, VOG0204, VOG0205, VOG4317, VOG0207, VOG4586, VOG0209, VOG6163, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG11074, VOG4687, VOG8917, VOG9091, VOG0703 |
| BGFOCPPG_3 | 6207 | 14668 | False | Myoviridae | VOG0226, VOG0205, VOG0384, VOG0382, VOG0083 |
Phigaro v2.4.0 (Database: Jan. 2024 release)