Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NAPJNNDB_35 | 15056 | 14859 | CspA | 2.30e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| NAPJNNDB_35 | 15056 | 14862 | CspR | 4.17e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NAPJNNDB_1 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_2 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_3 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_4 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_5 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_6 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_7 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_8 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_9 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_10 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_11 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_12 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_13 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_14 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_15 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_16 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_17 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_18 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_19 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_20 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_21 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_22 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_23 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_24 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_25 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_26 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_27 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_28 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_29 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_30 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_31 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_32 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_33 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_34 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_35 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_36 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_37 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_38 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_39 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_40 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_41 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_42 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_43 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_44 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_45 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_46 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_47 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_48 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_49 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_50 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_51 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_52 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_53 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_54 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_55 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_56 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_57 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_58 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_59 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_60 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_61 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_62 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_63 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_64 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_65 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_66 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_67 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_68 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_69 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_70 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_71 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_72 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_73 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_74 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_75 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_76 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_77 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_78 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_79 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_80 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_81 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_82 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_83 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_85 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_86 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_87 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_88 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_89 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_90 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_91 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_92 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_93 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_94 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_95 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_96 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_97 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_100 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_101 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_102 | 0.0 | 1.0 | 0.0 |
| NAPJNNDB_103 | 1.0 | 0.0 | 1.0 |
| NAPJNNDB_104 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NAPJNNDB_4 | 9196 | 23655 | False | Myoviridae | VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295 |
Phigaro v2.4.0 (Database: Jan. 2024 release)