Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FDCDCAIE_20 | 13965 | 13768 | CspA | 4.89e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| FDCDCAIE_20 | 13965 | 13771 | CspR | 8.87e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FDCDCAIE_1 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_2 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_3 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_4 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_5 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_6 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_7 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_8 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_9 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_10 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_11 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_12 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_13 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_14 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_15 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_16 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_17 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_18 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_19 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_20 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_21 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_22 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_23 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_24 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_25 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_26 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_27 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_28 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_29 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_30 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_31 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_32 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_33 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_34 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_35 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_36 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_37 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_38 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_39 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_40 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_41 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_42 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_43 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_44 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_45 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_46 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_47 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_48 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_49 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_50 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_51 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_52 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_53 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_54 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_55 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_56 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_57 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_58 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_59 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_60 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_61 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_62 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_63 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_64 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_65 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_66 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_67 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_69 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_70 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_71 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_72 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_73 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_74 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_75 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_76 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_77 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_78 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_80 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_81 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_82 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_83 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_84 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_85 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_86 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_87 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_88 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_89 | 0.0 | 1.0 | 0.0 |
| FDCDCAIE_90 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_91 | 1.0 | 0.0 | 1.0 |
| FDCDCAIE_92 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FDCDCAIE_1 | 104327 | 121632 | False | Myoviridae | VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295 |
Phigaro v2.4.0 (Database: Jan. 2024 release)