Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HOGBEMED_88 | 7388 | 6684 | WalR | 4.07e-116 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| HOGBEMED_35 | 3938 | 3744 | CspR | 2.19e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| HOGBEMED_35 | 3938 | 3741 | CspA | 3.36e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HOGBEMED_1 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_2 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_3 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_4 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_5 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_6 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_7 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_8 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_9 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_10 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_11 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_12 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_13 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_14 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_15 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_16 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_17 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_18 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_19 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_20 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_21 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_22 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_23 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_24 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_25 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_26 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_27 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_28 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_29 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_30 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_31 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_32 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_33 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_34 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_35 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_36 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_37 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_38 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_39 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_40 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_41 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_42 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_43 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_44 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_45 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_46 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_47 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_48 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_49 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_50 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_51 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_52 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_53 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_54 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_55 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_56 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_57 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_58 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_59 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_60 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_61 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_62 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_63 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_64 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_65 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_66 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_67 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_68 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_69 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_70 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_71 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_72 | 1.0 | 0.0 | 1.0 |
| HOGBEMED_73 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_74 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_75 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_76 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_77 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_78 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_79 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_80 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_81 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_82 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_83 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_84 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_85 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_86 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_87 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_88 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_89 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_90 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_91 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_92 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_93 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_94 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_95 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_96 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_97 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_98 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_99 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_100 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_101 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_102 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_103 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_104 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_105 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_106 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_107 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_108 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_109 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_110 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_111 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_112 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_113 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_114 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_115 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_116 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_117 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_118 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_119 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_120 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_121 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_122 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_123 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_124 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_125 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_126 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_127 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_128 | 1.0 | 0.0 | 1.0 |
| HOGBEMED_129 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_130 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_131 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_132 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_133 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_134 | 1.0 | 0.0 | 1.0 |
| HOGBEMED_135 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_136 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_137 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_138 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_139 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_140 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_141 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_142 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_143 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_144 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_145 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_146 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_147 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_148 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_149 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_150 | 0.0 | 1.0 | 0.0 |
| HOGBEMED_151 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HOGBEMED_140 | 3437 | 14625 | False | Siphoviridae | VOG4553, VOG4568, VOG4556, VOG2935, VOG1886, VOG4581, VOG4841, VOG0205, VOG6414, VOG4609, VOG4632, VOG11003 |
Phigaro v2.4.0 (Database: Jan. 2024 release)