Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KIGEMMJI_28 | 61287 | 61093 | CspA | 5.41e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KIGEMMJI_1 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_2 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_3 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_4 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_5 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_6 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_7 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_8 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_9 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_10 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_11 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_12 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_13 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_14 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_15 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_16 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_17 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_18 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_19 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_20 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_21 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_22 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_23 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_24 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_25 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_26 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_27 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_28 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_29 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_30 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_31 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_32 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_33 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_34 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_35 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_36 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_37 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_38 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_39 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_40 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_41 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_42 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_43 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_44 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_45 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_46 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_47 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_48 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_49 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_50 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_51 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_52 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_53 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_54 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_55 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_56 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_57 | 1.0 | 0.0 | 1.0 |
| KIGEMMJI_58 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_59 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_60 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_61 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_62 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_63 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_64 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_65 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_66 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_67 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_68 | 0.0 | 1.0 | 0.0 |
| KIGEMMJI_69 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KIGEMMJI_47 | 3557 | 23893 | False | Siphoviridae | VOG10227, VOG0720, VOG4564, VOG10914, VOG1329, VOG4713, VOG1320, VOG9583, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG3469, VOG4856, VOG4334, VOG4705 |
Phigaro v2.4.0 (Database: Jan. 2024 release)