Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ILNPHJAO_11 | 7173 | 6979 | CspA | 1.23e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ILNPHJAO_96 | 273 | 1148 | rep38 | 876 / 903 | 97.26 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ILNPHJAO_1 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_2 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_3 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_4 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_5 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_6 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_7 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_8 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_9 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_10 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_11 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_12 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_13 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_14 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_15 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_16 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_17 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_18 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_19 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_20 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_21 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_22 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_23 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_24 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_25 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_26 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_27 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_28 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_29 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_30 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_31 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_32 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_33 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_34 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_35 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_36 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_37 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_38 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_39 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_40 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_41 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_42 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_43 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_44 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_45 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_46 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_47 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_48 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_49 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_50 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_51 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_52 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_53 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_54 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_55 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_56 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_57 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_58 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_59 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_60 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_61 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_62 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_63 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_64 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_65 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_66 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_67 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_68 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_69 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_70 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_71 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_72 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_73 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_74 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_75 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_76 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_77 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_78 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_79 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_80 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_81 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_82 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_83 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_84 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_85 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_86 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_87 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_88 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_89 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_90 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_91 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_92 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_93 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_94 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_95 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_96 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_97 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_98 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_99 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_100 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_101 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_102 | 1.0 | 0.0 | 1.0 |
| ILNPHJAO_103 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_104 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_105 | 0.0 | 1.0 | 0.0 |
| ILNPHJAO_106 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ILNPHJAO_79 | 5848 | 24505 | False | Siphoviridae | VOG0275, VOG9667, VOG0650, VOG6100, VOG5724, VOG7429, VOG4609, VOG6414, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0204, VOG0198, VOG5944, VOG4615, VOG0243, VOG5826 |
Phigaro v2.4.0 (Database: Jan. 2024 release)