Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FLNIMPEH_39 | 31829 | 32023 | CspA | 2.18e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FLNIMPEH_1 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_2 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_3 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_4 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_5 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_6 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_7 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_8 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_9 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_10 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_11 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_12 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_13 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_14 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_15 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_16 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_17 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_18 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_19 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_20 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_21 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_22 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_23 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_24 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_25 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_26 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_27 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_28 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_29 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_30 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_31 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_32 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_33 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_34 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_35 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_36 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_37 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_38 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_39 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_40 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_41 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_42 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_43 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_44 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_45 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_46 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_47 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_48 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_49 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_50 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_51 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_52 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_53 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_54 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_55 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_56 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_57 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_58 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_59 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_60 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_61 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_62 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_63 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_64 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_65 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_66 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_67 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_68 | 1.0 | 0.0 | 1.0 |
| FLNIMPEH_69 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_70 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_71 | 0.0 | 1.0 | 0.0 |
| FLNIMPEH_72 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FLNIMPEH_51 | 877 | 22618 | False | Siphoviridae | VOG4581, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0083, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997 |
Phigaro v2.4.0 (Database: Jan. 2024 release)