Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKDHGCLL_32 | 51875 | 53080 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| BKDHGCLL_67 | 203 | 1093 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKDHGCLL_67 | 203 | 1090 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| BKDHGCLL_32 | 53105 | 53614 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| BKDHGCLL_32 | 51875 | 53077 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BKDHGCLL_1 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_2 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_3 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_4 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_5 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_6 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_7 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_8 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_9 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_10 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_11 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_12 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_13 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_14 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_15 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_16 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_17 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_18 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_19 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_20 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_21 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_22 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_23 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_24 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_25 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_26 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_27 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_28 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_29 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_30 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_31 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_32 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_33 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_34 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_35 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_36 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_37 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_38 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_39 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_40 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_41 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_42 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_43 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_44 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_45 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_46 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_47 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_48 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_49 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_50 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_51 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_52 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_53 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_54 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_55 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_56 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_57 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_58 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_59 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_60 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_61 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_62 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_63 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_64 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_65 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_66 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_67 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_68 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_69 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_70 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_71 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_72 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_73 | 1.0 | 0.0 | 1.0 |
| BKDHGCLL_75 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_76 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_77 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_78 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_79 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_80 | 0.0 | 1.0 | 0.0 |
| BKDHGCLL_81 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BKDHGCLL_15 | 23337 | 31330 | True | Siphoviridae | VOG7055, |
| BKDHGCLL_23 | 2992 | 47081 | False | Siphoviridae | VOG6921, |
Phigaro v2.4.0 (Database: Jan. 2024 release)