Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GMCKDHEM_42 | 2965 | 3855 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GMCKDHEM_42 | 2968 | 3855 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GMCKDHEM_1 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_2 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_3 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_4 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_5 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_6 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_7 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_8 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_9 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_10 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_11 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_12 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_13 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_14 | 1.0 | 0.0 | 1.0 |
| GMCKDHEM_15 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_16 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_17 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_18 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_19 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_20 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_21 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_22 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_23 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_24 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_25 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_26 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_27 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_28 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_29 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_30 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_31 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_32 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_33 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_34 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_35 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_36 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_37 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_38 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_39 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_40 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_41 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_42 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_43 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_44 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_45 | 1.0 | 0.0 | 1.0 |
| GMCKDHEM_46 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_47 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_48 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_49 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_50 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_51 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_52 | 0.0 | 1.0 | 0.0 |
| GMCKDHEM_53 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)