Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 0 | 0 | 8.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FIAIMDAH_1 | 104294 | 105028 | ErmG | ARO:3000522 | ErmG | 98.36 | 100.00 | L42817.1 |
| FIAIMDAH_74 | 8337 | 9302 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| FIAIMDAH_32 | 5043 | 5933 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
| FIAIMDAH_32 | 3014 | 3904 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
| FIAIMDAH_83 | 1916 | 3121 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FIAIMDAH_74 | 8337 | 9302 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| FIAIMDAH_74 | 8337 | 9302 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| FIAIMDAH_74 | 8337 | 9302 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| FIAIMDAH_74 | 8337 | 9302 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| FIAIMDAH_1 | 104294 | 105028 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| FIAIMDAH_1 | 108357 | 109571 | mef(A) | Erythromycin, Azithromycin | 94.16 | 99.75 | AF227520 |
| FIAIMDAH_1 | 106782 | 108231 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 91.88 | 98.91 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FIAIMDAH_74 | 8340 | 9302 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| FIAIMDAH_83 | 3146 | 3655 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| FIAIMDAH_32 | 3017 | 3904 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| FIAIMDAH_32 | 5046 | 5933 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| FIAIMDAH_1 | 108348 | 109571 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 99.26 | 100.00 | WP_012102963.1 |
| FIAIMDAH_83 | 1916 | 3118 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
| FIAIMDAH_1 | 104297 | 105028 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 98.77 | 100.00 | WP_014387027.1 |
| FIAIMDAH_1 | 106777 | 108231 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 91.96 | 99.59 | WP_000420313.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FIAIMDAH_1 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_2 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_3 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_4 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_5 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_6 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_7 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_8 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_9 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_10 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_11 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_12 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_13 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_14 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_15 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_16 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_17 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_18 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_19 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_20 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_21 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_22 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_23 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_24 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_25 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_26 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_27 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_28 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_29 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_30 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_31 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_32 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_33 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_34 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_35 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_36 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_37 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_38 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_39 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_40 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_41 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_42 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_43 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_44 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_45 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_46 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_47 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_48 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_49 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_50 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_51 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_52 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_53 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_54 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_55 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_56 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_57 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_58 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_59 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_60 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_61 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_62 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_63 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_64 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_65 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_66 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_67 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_68 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_69 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_70 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_71 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_72 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_73 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_74 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_75 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_76 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_77 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_78 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_79 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_80 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_81 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_82 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_83 | 0.0 | 1.0 | 0.0 |
| FIAIMDAH_84 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_85 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_86 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_87 | 1.0 | 0.0 | 1.0 |
| FIAIMDAH_88 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FIAIMDAH_7 | 12618 | 15503 | False | Myoviridae | VOG10050, |
Phigaro v2.4.0 (Database: Jan. 2024 release)