Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MPKOBNPN_44 | 185471 | 186175 | WalR | 1.57e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MPKOBNPN_19 | 29721 | 29524 | CspR | 5.53e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MPKOBNPN_23 | 14291 | 15141 | rep38 | 856 / 903 | 85.05 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MPKOBNPN_1 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_2 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_3 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_4 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_5 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_6 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_7 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_8 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_9 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_10 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_11 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_12 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_13 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_14 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_15 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_16 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_17 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_18 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_19 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_20 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_21 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_22 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_23 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_24 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_25 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_26 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_27 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_28 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_29 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_30 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_31 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_32 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_33 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_34 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_35 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_36 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_37 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_38 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_39 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_40 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_42 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_43 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_44 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_45 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_46 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_48 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_49 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_50 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_52 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_53 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_54 | 1.0 | 0.0 | 1.0 |
| MPKOBNPN_55 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_65 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_76 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_87 | 0.0 | 1.0 | 0.0 |
| MPKOBNPN_94 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MPKOBNPN_7 | 4977 | 10247 | False | Siphoviridae | VOG3307, VOG5317, VOG5280, VOG0982, VOG0189, VOG4799, VOG10867 |
| MPKOBNPN_17 | 17197 | 35235 | False | Siphoviridae | VOG7656, VOG2215, VOG4995, VOG4552, VOG6450, VOG0181, VOG10867, VOG4967, VOG3642, VOG0321, VOG0322, VOG4548, VOG3777, VOG6545, VOG4606, VOG0327, VOG9759, VOG0195, VOG0152, VOG3643, VOG0044, VOG0198, VOG4570, VOG10904, VOG4549, VOG6794 |
| MPKOBNPN_19 | 2626 | 9186 | False | Siphoviridae | VOG0152, VOG9741, VOG0536, VOG9860, VOG11003, VOG8987, VOG1638, VOG6238, VOG4566, VOG0186, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)