Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IMGDKMAP_18 | 45581 | 46531 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| IMGDKMAP_18 | 45581 | 46531 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| IMGDKMAP_18 | 45581 | 46531 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| IMGDKMAP_18 | 45581 | 46531 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IMGDKMAP_18 | 45580 | 46533 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IMGDKMAP_32 | 12400 | 10820 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IMGDKMAP_1 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_2 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_3 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_4 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_5 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_6 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_7 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_8 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_9 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_10 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_11 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_12 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_13 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_14 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_15 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_16 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_17 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_18 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_19 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_20 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_21 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_22 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_23 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_24 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_25 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_26 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_27 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_28 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_29 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_30 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_31 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_32 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_33 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_34 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_35 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_36 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_37 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_38 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_39 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_40 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_41 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_42 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_43 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_44 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_45 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_46 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_47 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_48 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_49 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_50 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_51 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_52 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_53 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_54 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_55 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_56 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_57 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_58 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_59 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_60 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_61 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_62 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_63 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_64 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_65 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_66 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_67 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_68 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_69 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_70 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_71 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_72 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_73 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_74 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_75 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_76 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_77 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_78 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_79 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_80 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_81 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_82 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_83 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_84 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_85 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_86 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_87 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_88 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_89 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_90 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_91 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_92 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_93 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_94 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_95 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_96 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_97 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_98 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_99 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_100 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_101 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_102 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_103 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_104 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_105 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_106 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_107 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_108 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_109 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_110 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_111 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_112 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_113 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_114 | 0.0 | 1.0 | 0.0 |
| IMGDKMAP_115 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_116 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_117 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_118 | 1.0 | 0.0 | 1.0 |
| IMGDKMAP_119 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)