Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PDJLIGFF_38 | 38546 | 39412 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PDJLIGFF_54 | 3062 | 3835 | aad9 | ANT(9) family aminoglycoside nucleotidyltransferase | EXACTX | 100.00 | 100.00 | WP_002578722.1 |
| PDJLIGFF_38 | 38549 | 39412 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PDJLIGFF_1 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_2 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_3 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_4 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_5 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_6 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_7 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_8 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_9 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_10 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_11 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_12 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_13 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_14 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_15 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_16 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_17 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_18 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_19 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_20 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_21 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_22 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_23 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_24 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_25 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_26 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_27 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_28 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_29 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_30 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_31 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_32 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_33 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_34 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_35 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_36 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_37 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_38 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_39 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_40 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_41 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_42 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_43 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_44 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_45 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_46 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_47 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_48 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_49 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_50 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_51 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_52 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_53 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_54 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_55 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_56 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_57 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_58 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_59 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_60 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_61 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_62 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_63 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_64 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_65 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_66 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_67 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_68 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_69 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_70 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_71 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_72 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_73 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_74 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_75 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_76 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_77 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_78 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_79 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_80 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_81 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_82 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_83 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_84 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_85 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_86 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_87 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_88 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_89 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_90 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_91 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_92 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_93 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_94 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_95 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_96 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_97 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_98 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_99 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_100 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_101 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_102 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_103 | 0.0 | 1.0 | 0.0 |
| PDJLIGFF_105 | 1.0 | 0.0 | 1.0 |
| PDJLIGFF_106 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PDJLIGFF_29 | 6105 | 16853 | False | Unknown | VOG1198, |
| PDJLIGFF_41 | 19577 | 28774 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)