Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CEDCOPAD_203 | 35 | 1615 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CEDCOPAD_1 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_2 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_3 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_4 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_5 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_6 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_7 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_8 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_9 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_10 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_11 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_12 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_13 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_14 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_15 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_16 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_17 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_18 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_19 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_20 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_21 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_22 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_23 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_24 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_25 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_26 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_27 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_28 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_29 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_30 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_31 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_32 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_33 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_34 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_35 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_36 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_37 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_38 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_39 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_40 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_41 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_42 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_43 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_44 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_45 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_46 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_47 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_48 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_49 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_50 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_51 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_52 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_53 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_54 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_55 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_56 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_57 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_58 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_59 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_60 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_61 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_62 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_63 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_64 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_65 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_66 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_67 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_68 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_69 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_70 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_71 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_72 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_73 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_74 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_75 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_76 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_77 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_78 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_79 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_80 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_81 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_82 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_83 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_84 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_85 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_86 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_87 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_88 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_89 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_90 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_91 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_92 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_93 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_94 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_95 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_96 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_97 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_98 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_99 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_100 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_101 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_102 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_103 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_104 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_105 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_106 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_107 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_108 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_109 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_110 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_111 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_112 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_113 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_114 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_115 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_116 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_117 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_118 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_119 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_120 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_121 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_122 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_123 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_124 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_125 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_126 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_127 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_128 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_129 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_130 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_131 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_132 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_133 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_134 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_135 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_136 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_137 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_138 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_139 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_140 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_141 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_142 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_143 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_144 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_145 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_146 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_147 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_148 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_149 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_150 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_151 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_152 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_153 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_154 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_155 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_156 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_157 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_158 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_159 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_160 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_161 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_162 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_163 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_164 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_165 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_166 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_167 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_168 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_169 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_170 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_171 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_172 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_173 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_174 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_175 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_176 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_177 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_178 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_179 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_180 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_181 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_182 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_183 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_184 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_185 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_186 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_187 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_188 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_189 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_190 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_191 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_192 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_193 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_194 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_195 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_196 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_197 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_198 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_199 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_200 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_201 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_202 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_203 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_204 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_205 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_206 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_207 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_208 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_209 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_210 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_211 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_212 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_213 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_214 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_215 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_216 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_217 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_218 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_219 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_220 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_221 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_222 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_223 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_224 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_225 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_226 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_227 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_228 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_229 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_230 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_231 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_232 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_233 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_234 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_235 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_236 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_237 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_238 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_239 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_240 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_241 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_242 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_243 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_244 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_245 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_246 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_247 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_248 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_249 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_250 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_251 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_252 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_253 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_254 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_255 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_256 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_257 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_258 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_259 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_260 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_261 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_262 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_263 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_264 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_265 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_266 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_267 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_268 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_269 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_270 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_271 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_272 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_273 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_274 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_275 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_276 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_277 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_278 | 0.0 | 1.0 | 0.0 |
| CEDCOPAD_279 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_280 | 1.0 | 0.0 | 1.0 |
| CEDCOPAD_281 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CEDCOPAD_27 | 24668 | 28903 | False | Unknown | VOG7154, |
Phigaro v2.4.0 (Database: Jan. 2024 release)