Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OEDJIBDL_72 | 106393 | 105689 | WalR | 1.70e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| OEDJIBDL_23 | 14520 | 14717 | CspR | 8.87e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OEDJIBDL_11 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_19 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_20 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_21 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_22 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_23 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_24 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_25 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_26 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_27 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_28 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_29 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_30 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_31 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_32 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_33 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_34 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_35 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_36 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_37 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_38 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_39 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_40 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_41 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_42 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_43 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_44 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_45 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_46 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_47 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_48 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_49 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_50 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_52 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_53 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_54 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_55 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_56 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_57 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_58 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_59 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_60 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_61 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_62 | 1.0 | 0.0 | 1.0 |
| OEDJIBDL_63 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_72 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_83 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_92 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_102 | 0.0 | 1.0 | 0.0 |
| OEDJIBDL_113 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OEDJIBDL_27 | 2927 | 12473 | False | Siphoviridae | VOG4552, VOG5353, VOG6495, VOG4602, VOG7656, VOG3685, VOG4567, VOG6054, VOG6884, VOG0275 |
| OEDJIBDL_39 | 608 | 18640 | False | Siphoviridae | VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG7880, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637 |
Phigaro v2.4.0 (Database: Jan. 2024 release)