Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MMJOALGJ_1233705233001WalR2.61e-114transcriptional regulatory protein84.25100.00EPH95667
MMJOALGJ_5144975144781CspR8.48e-30cold shock protein84.6198.48AAO82613
MMJOALGJ_5144975144778CspA1.30e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
MMJOALGJ_478871843repUS64958 / 95492.07JN601038

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
MMJOALGJ_10.01.00.0
MMJOALGJ_20.01.00.0
MMJOALGJ_30.01.00.0
MMJOALGJ_40.01.00.0
MMJOALGJ_50.01.00.0
MMJOALGJ_60.01.00.0
MMJOALGJ_70.01.00.0
MMJOALGJ_80.01.00.0
MMJOALGJ_90.01.00.0
MMJOALGJ_100.01.00.0
MMJOALGJ_110.01.00.0
MMJOALGJ_120.01.00.0
MMJOALGJ_130.01.00.0
MMJOALGJ_140.01.00.0
MMJOALGJ_150.01.00.0
MMJOALGJ_160.01.00.0
MMJOALGJ_170.01.00.0
MMJOALGJ_180.01.00.0
MMJOALGJ_190.01.00.0
MMJOALGJ_200.01.00.0
MMJOALGJ_210.01.00.0
MMJOALGJ_220.01.00.0
MMJOALGJ_230.01.00.0
MMJOALGJ_240.01.00.0
MMJOALGJ_251.00.01.0
MMJOALGJ_261.00.01.0
MMJOALGJ_271.00.01.0
MMJOALGJ_281.00.01.0
MMJOALGJ_290.01.00.0
MMJOALGJ_301.00.01.0
MMJOALGJ_310.01.00.0
MMJOALGJ_321.00.01.0
MMJOALGJ_330.01.00.0
MMJOALGJ_341.00.01.0
MMJOALGJ_350.01.00.0
MMJOALGJ_361.00.01.0
MMJOALGJ_371.00.01.0
MMJOALGJ_381.00.01.0
MMJOALGJ_391.00.01.0
MMJOALGJ_401.00.01.0
MMJOALGJ_411.00.01.0
MMJOALGJ_421.00.01.0
MMJOALGJ_431.00.01.0
MMJOALGJ_450.01.00.0
MMJOALGJ_461.00.01.0
MMJOALGJ_471.00.01.0
MMJOALGJ_481.00.01.0
MMJOALGJ_491.00.01.0
MMJOALGJ_500.01.00.0
MMJOALGJ_521.00.01.0
MMJOALGJ_531.00.01.0
MMJOALGJ_541.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
MMJOALGJ_1234626245683FalseSiphoviridaeVOG8908, VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632
MMJOALGJ_9254632300FalseSiphoviridaeVOG6005, VOG0198, VOG0531, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG5852, VOG0660, VOG5631, VOG4605, VOG4599, VOG10957, VOG8870, VOG9998
MMJOALGJ_171422844086FalseSiphoviridaeVOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG4571, VOG4571, VOG4571, VOG0198, VOG4010, VOG3643, VOG0044, VOG0586, VOG4693, VOG0189, VOG4799
MMJOALGJ_21444333110FalseSiphoviridaeVOG4566, VOG4552, VOG4693, VOG0198, VOG0796, VOG4544, VOG0720, VOG7038, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294, VOG1637

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements