Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BPHAPGPK_1 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_2 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_3 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_4 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_5 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_6 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_7 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_8 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_9 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_10 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_11 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_12 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_13 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_14 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_15 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_16 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_17 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_18 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_19 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_20 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_21 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_22 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_23 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_24 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_25 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_26 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_27 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_28 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_29 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_30 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_31 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_32 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_33 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_34 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_35 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_36 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_37 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_38 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_39 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_40 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_42 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_43 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_44 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_45 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_46 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_47 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_48 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_49 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_50 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_51 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_52 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_53 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_54 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_55 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_56 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_57 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_58 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_59 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_60 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_61 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_62 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_63 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_64 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_65 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_66 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_67 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_68 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_69 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_70 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_71 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_72 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_73 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_74 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_75 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_76 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_77 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_78 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_79 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_80 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_81 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_82 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_83 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_84 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_85 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_86 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_87 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_88 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_89 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_90 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_91 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_92 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_93 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_94 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_95 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_96 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_97 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_98 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_99 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_100 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_101 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_102 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_103 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_104 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_105 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_106 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_107 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_108 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_109 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_110 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_111 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_112 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_113 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_114 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_115 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_116 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_117 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_118 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_119 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_120 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_121 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_122 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_123 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_124 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_125 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_126 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_127 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_128 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_129 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_130 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_131 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_132 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_133 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_134 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_135 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_136 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_137 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_138 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_139 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_140 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_141 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_142 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_143 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_144 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_145 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_146 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_147 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_148 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_149 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_150 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_151 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_152 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_153 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_154 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_155 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_156 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_157 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_158 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_159 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_160 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_161 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_162 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_163 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_164 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_165 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_166 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_167 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_168 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_169 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_170 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_171 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_172 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_173 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_174 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_175 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_176 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_177 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_178 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_179 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_180 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_182 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_183 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_184 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_185 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_186 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_190 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_193 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_194 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_195 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_196 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_197 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_198 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_199 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_200 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_201 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_202 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_203 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_204 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_205 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_206 | 0.0 | 1.0 | 0.0 |
| BPHAPGPK_207 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_209 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_210 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_211 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_213 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_214 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_215 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_216 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_219 | 1.0 | 0.0 | 1.0 |
| BPHAPGPK_222 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BPHAPGPK_67 | 66665 | 69327 | False | Siphoviridae | VOG1302, VOG7236, VOG8609, VOG1485, VOG1250 |
| BPHAPGPK_67 | 74365 | 102630 | False | Myoviridae | VOG4693, VOG0198, VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691 |
| BPHAPGPK_86 | 3057 | 26698 | False | Myoviridae | VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407, VOG1837, VOG4618, VOG5318, VOG0638, VOG8269, VOG0198, VOG9667 |
| BPHAPGPK_86 | 38016 | 41975 | False | Myoviridae / Siphoviridae | VOG10735, VOG4995, VOG2215, VOG9667, VOG4602, VOG1561 |
| BPHAPGPK_109 | 41432 | 79155 | False | Siphoviridae | VOG7017, VOG0861, VOG4705, VOG9945, VOG6540, VOG0083, VOG7017, VOG4659, VOG4633, VOG4545, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG3349, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307, VOG3307, VOG2915, VOG4606, VOG6545, VOG4548, VOG0322, VOG10904, VOG4611, VOG9708, VOG5342, VOG4995 |
| BPHAPGPK_112 | 32527 | 36243 | False | Myoviridae / Siphoviridae | VOG6955, VOG9667, VOG2228, VOG4799, VOG8288, VOG5458 |
Phigaro v2.4.0 (Database: Jan. 2024 release)