Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CLPCLEEF_1 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_2 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_3 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_4 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_5 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_6 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_7 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_8 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_9 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_10 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_11 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_12 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_13 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_14 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_15 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_16 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_17 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_18 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_19 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_20 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_21 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_22 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_23 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_24 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_25 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_26 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_27 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_28 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_29 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_30 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_31 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_32 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_33 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_34 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_35 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_36 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_37 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_38 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_39 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_40 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_41 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_42 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_43 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_44 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_45 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_46 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_47 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_48 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_49 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_50 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_51 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_52 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_53 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_54 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_55 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_56 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_57 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_58 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_59 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_60 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_61 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_62 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_63 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_64 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_65 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_66 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_67 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_68 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_69 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_70 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_71 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_72 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_73 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_74 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_75 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_76 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_77 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_78 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_79 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_80 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_81 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_82 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_83 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_84 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_85 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_86 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_87 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_88 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_89 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_90 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_91 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_92 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_93 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_94 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_95 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_96 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_97 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_98 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_99 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_100 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_101 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_102 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_103 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_104 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_105 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_106 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_107 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_108 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_109 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_110 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_111 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_112 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_113 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_114 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_115 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_116 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_117 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_118 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_119 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_120 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_121 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_122 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_123 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_124 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_125 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_126 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_127 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_128 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_129 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_130 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_131 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_132 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_133 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_134 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_135 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_136 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_137 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_138 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_139 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_140 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_141 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_142 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_143 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_144 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_145 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_146 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_147 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_148 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_149 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_150 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_151 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_152 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_153 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_154 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_155 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_156 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_157 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_158 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_159 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_160 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_161 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_162 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_163 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_164 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_165 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_166 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_167 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_168 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_169 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_170 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_171 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_172 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_173 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_174 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_175 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_176 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_177 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_178 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_179 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_180 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_182 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_183 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_184 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_185 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_186 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_187 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_188 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_189 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_191 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_192 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_193 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_194 | 1.0 | 0.0 | 1.0 |
| CLPCLEEF_195 | 0.0 | 1.0 | 0.0 |
| CLPCLEEF_196 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CLPCLEEF_40 | 4629 | 9518 | False | Siphoviridae | VOG4603, VOG4552, VOG2703, VOG0234, VOG0906, VOG4566 |
| CLPCLEEF_40 | 11156 | 39792 | False | Siphoviridae | VOG0198, VOG1422, VOG4664, VOG1177, VOG4618, VOG5532, VOG4544, VOG0691, VOG0692, VOG0686, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4760, VOG4633, VOG4659, VOG4645, VOG4856 |
| CLPCLEEF_62 | 46248 | 94019 | False | Siphoviridae | VOG4705, VOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520, VOG4552, VOG2228, VOG9708, VOG4611, VOG0322, VOG4548, VOG6545, VOG4606, VOG3307, VOG3307, VOG3307, VOG5278, VOG3307, VOG0327, VOG3349, VOG6005, VOG0198, VOG4841, VOG4581, VOG2545, VOG0376, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG4545, VOG4633, VOG4659, VOG8355, VOG1594, VOG6474, VOG6540, VOG8608, VOG4705, VOG0861 |
| CLPCLEEF_63 | 74037 | 105667 | False | Myoviridae | VOG4693, VOG0198, VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG9945 |
Phigaro v2.4.0 (Database: Jan. 2024 release)