Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JAFFGJDM_1 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_2 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_3 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_4 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_5 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_6 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_7 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_8 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_9 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_10 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_11 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_12 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_13 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_14 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_15 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_16 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_17 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_18 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_19 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_20 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_21 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_22 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_23 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_24 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_25 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_26 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_27 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_28 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_29 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_30 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_31 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_32 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_33 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_34 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_35 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_36 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_37 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_38 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_39 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_40 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_41 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_42 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_43 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_44 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_45 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_46 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_47 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_48 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_49 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_50 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_51 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_52 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_53 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_54 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_55 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_56 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_57 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_58 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_59 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_60 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_61 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_62 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_63 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_64 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_65 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_66 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_67 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_68 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_69 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_70 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_71 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_72 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_73 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_74 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_75 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_76 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_77 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_78 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_79 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_80 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_81 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_82 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_83 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_84 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_85 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_86 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_87 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_88 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_89 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_90 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_91 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_92 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_93 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_94 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_95 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_96 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_97 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_98 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_99 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_100 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_101 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_102 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_103 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_104 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_105 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_106 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_107 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_108 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_109 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_110 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_111 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_112 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_113 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_114 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_115 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_116 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_117 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_118 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_119 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_120 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_121 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_122 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_123 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_124 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_125 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_126 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_127 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_128 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_129 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_130 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_131 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_132 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_133 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_134 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_135 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_136 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_137 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_138 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_139 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_140 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_141 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_142 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_143 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_144 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_145 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_146 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_147 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_148 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_149 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_150 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_151 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_152 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_153 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_154 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_155 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_156 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_157 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_158 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_159 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_160 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_161 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_162 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_163 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_164 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_165 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_166 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_167 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_168 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_169 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_170 | 0.0 | 1.0 | 0.0 |
| JAFFGJDM_171 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_172 | 1.0 | 0.0 | 1.0 |
| JAFFGJDM_173 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JAFFGJDM_52 | 57650 | 85185 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845 |
| JAFFGJDM_68 | 17398 | 45136 | False | Siphoviridae | VOG4705, VOG4904, VOG6540, VOG4687, VOG0083, VOG7017, VOG4659, VOG4633, VOG3179, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG5051, VOG1886, VOG4581, VOG1648, VOG4841, VOG0198, VOG6005, VOG1698, VOG1446 |
| JAFFGJDM_142 | 13521 | 28175 | False | Myoviridae | VOG8232, VOG0198, VOG0686, VOG0796, VOG7407, VOG1912, VOG5027, VOG4865, VOG1915, VOG6932, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883 |
| JAFFGJDM_143 | 15555 | 25698 | False | Myoviridae | VOG0686, VOG4618, VOG7407, VOG1912, VOG4564, VOG1915, VOG1942, VOG4710 |
Phigaro v2.4.0 (Database: Jan. 2024 release)