Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LFMJAGOB_1 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_2 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_3 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_4 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_5 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_6 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_7 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_8 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_9 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_10 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_11 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_12 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_13 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_14 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_15 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_16 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_17 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_18 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_19 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_20 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_21 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_22 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_23 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_24 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_25 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_26 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_27 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_28 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_29 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_30 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_31 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_32 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_33 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_34 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_35 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_36 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_37 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_38 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_39 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_40 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_41 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_42 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_43 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_44 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_45 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_46 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_47 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_48 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_49 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_50 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_51 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_52 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_53 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_54 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_55 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_56 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_57 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_58 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_59 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_60 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_61 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_62 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_63 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_64 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_65 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_66 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_67 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_68 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_69 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_70 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_71 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_72 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_73 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_74 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_75 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_76 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_77 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_78 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_79 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_80 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_81 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_82 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_83 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_84 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_85 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_86 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_87 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_88 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_89 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_90 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_91 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_92 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_93 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_94 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_95 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_96 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_97 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_98 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_99 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_100 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_101 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_102 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_103 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_104 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_105 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_106 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_107 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_108 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_109 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_110 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_111 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_112 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_113 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_114 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_115 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_116 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_117 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_118 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_119 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_120 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_121 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_122 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_123 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_124 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_125 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_126 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_127 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_128 | 0.0 | 1.0 | 0.0 |
| LFMJAGOB_129 | 1.0 | 0.0 | 1.0 |
| LFMJAGOB_130 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LFMJAGOB_2 | 10316 | 36524 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| LFMJAGOB_4 | 13775 | 41432 | False | Siphoviridae | VOG1446, VOG1698, VOG6005, VOG0198, VOG4841, VOG1648, VOG4581, VOG1886, VOG5051, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4545, VOG4633, VOG4659, VOG7017, VOG0083, VOG4687, VOG6540, VOG4904 |
Phigaro v2.4.0 (Database: Jan. 2024 release)