Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MEAEOFIB_4 | 1947 | 2144 | CspA | 7.47e-29 | cold shock protein | 81.82 | 100.00 | CAA62903 |
| MEAEOFIB_4 | 1947 | 2141 | CspR | 2.24e-28 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MEAEOFIB_70 | 4580 | 5276 | repUS73 | 702 / 1101 | 84.33 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MEAEOFIB_1 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_2 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_3 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_4 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_5 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_6 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_7 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_8 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_9 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_10 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_11 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_12 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_13 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_14 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_15 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_16 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_17 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_18 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_19 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_20 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_21 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_22 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_23 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_24 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_25 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_26 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_27 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_28 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_29 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_30 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_31 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_32 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_33 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_34 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_35 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_36 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_37 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_38 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_39 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_40 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_41 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_42 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_43 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_44 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_45 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_46 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_47 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_48 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_49 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_50 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_51 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_52 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_53 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_54 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_55 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_56 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_57 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_58 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_59 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_60 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_61 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_62 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_63 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_64 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_65 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_66 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_67 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_68 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_69 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_70 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_71 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_72 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_73 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_74 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_75 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_76 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_77 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_78 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_79 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_80 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_81 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_82 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_83 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_84 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_85 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_86 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_87 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_88 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_89 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_90 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_91 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_92 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_93 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_94 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_95 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_96 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_97 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_98 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_99 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_100 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_101 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_102 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_103 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_104 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_105 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_106 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_107 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_108 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_109 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_110 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_111 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_112 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_113 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_114 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_115 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_116 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_117 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_118 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_120 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_121 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_122 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_123 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_124 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_125 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_126 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_127 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_128 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_129 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_130 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_132 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_133 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_134 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_136 | 0.0 | 1.0 | 0.0 |
| MEAEOFIB_137 | 1.0 | 0.0 | 1.0 |
| MEAEOFIB_138 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MEAEOFIB_6 | 29693 | 34946 | False | Siphoviridae | VOG1292, VOG4624 |
| MEAEOFIB_12 | 14927 | 28866 | False | Myoviridae | VOG3738, VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085 |
Phigaro v2.4.0 (Database: Jan. 2024 release)