Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MDPIBOCI_38 | 24146 | 23949 | CspA | 6.23e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| MDPIBOCI_38 | 24146 | 23952 | CspR | 5.30e-28 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MDPIBOCI_1 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_2 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_3 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_4 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_5 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_6 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_7 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_8 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_9 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_10 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_11 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_12 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_13 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_14 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_15 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_16 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_17 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_18 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_19 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_20 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_21 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_22 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_23 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_24 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_25 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_26 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_27 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_28 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_29 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_30 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_31 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_32 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_33 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_34 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_35 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_36 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_37 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_38 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_39 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_40 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_41 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_42 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_43 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_44 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_45 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_46 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_47 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_48 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_49 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_50 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_51 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_52 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_53 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_54 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_55 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_56 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_57 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_58 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_59 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_60 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_61 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_62 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_63 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_64 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_65 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_66 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_67 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_68 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_69 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_70 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_71 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_72 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_73 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_74 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_75 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_76 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_77 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_78 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_79 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_80 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_81 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_82 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_83 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_84 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_85 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_86 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_87 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_88 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_89 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_90 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_91 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_92 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_93 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_94 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_95 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_97 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_98 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_99 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_100 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_101 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_102 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_103 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_104 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_105 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_107 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_108 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_109 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_110 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_111 | 0.0 | 1.0 | 0.0 |
| MDPIBOCI_112 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_113 | 1.0 | 0.0 | 1.0 |
| MDPIBOCI_114 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MDPIBOCI_35 | 8698 | 27939 | False | Siphoviridae | VOG6422, VOG0641, VOG0648, VOG4599, VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG1300, VOG4564, VOG0720, VOG10227 |
| MDPIBOCI_45 | 4260 | 21132 | False | Siphoviridae | VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG4581, VOG0198, VOG4548, VOG0327, VOG4606 |
| MDPIBOCI_81 | 45821 | 53860 | False | Siphoviridae | VOG0275, VOG4585, VOG1159, VOG4677 |
Phigaro v2.4.0 (Database: Jan. 2024 release)