Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MODKOLNA_135 | 23993 | 23289 | WalR | 5.93e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MODKOLNA_146 | 54492 | 54295 | CspR | 1.08e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MODKOLNA_1 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_2 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_3 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_4 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_5 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_6 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_7 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_8 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_9 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_10 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_11 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_12 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_13 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_14 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_15 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_16 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_17 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_18 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_20 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_21 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_22 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_23 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_24 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_25 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_26 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_27 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_28 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_29 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_30 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_31 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_32 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_33 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_34 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_35 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_36 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_37 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_38 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_39 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_40 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_41 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_42 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_43 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_44 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_45 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_46 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_47 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_48 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_49 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_51 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_52 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_53 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_54 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_55 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_56 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_57 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_58 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_59 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_60 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_61 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_62 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_63 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_64 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_65 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_66 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_67 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_68 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_69 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_70 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_71 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_72 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_73 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_74 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_75 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_76 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_77 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_78 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_79 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_80 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_81 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_82 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_83 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_84 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_85 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_86 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_87 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_88 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_89 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_90 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_91 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_92 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_93 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_94 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_95 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_96 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_97 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_98 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_99 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_100 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_101 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_102 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_103 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_104 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_105 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_106 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_107 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_108 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_109 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_110 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_111 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_112 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_113 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_114 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_115 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_116 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_117 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_118 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_119 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_120 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_121 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_122 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_123 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_124 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_125 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_126 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_127 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_128 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_129 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_130 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_131 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_132 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_133 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_134 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_135 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_136 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_137 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_138 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_139 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_140 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_141 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_142 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_143 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_144 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_145 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_146 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_147 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_148 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_149 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_150 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_151 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_152 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_153 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_154 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_155 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_156 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_157 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_158 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_159 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_160 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_161 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_162 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_163 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_164 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_165 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_166 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_167 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_168 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_169 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_170 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_171 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_172 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_173 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_174 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_175 | 0.0 | 1.0 | 0.0 |
| MODKOLNA_176 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_177 | 1.0 | 0.0 | 1.0 |
| MODKOLNA_178 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MODKOLNA_89 | 4122 | 42169 | False | Siphoviridae | VOG6495, VOG11003, VOG4552, VOG10059, VOG0181, VOG10867, VOG3642, VOG4799, VOG0025, VOG7735, VOG4693, VOG9741, VOG4237, VOG2820, VOG3643, VOG7441, VOG0044, VOG1563, VOG0198, VOG4570, VOG4549, VOG0531, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG5601, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG4605, VOG4599, VOG4705, VOG1637, VOG0703 |
| MODKOLNA_102 | 99218 | 127961 | False | Siphoviridae | VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG5998, VOG5562, VOG0198, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637 |
| MODKOLNA_113 | 54159 | 88867 | False | Siphoviridae | VOG0535, VOG0322, VOG0226, VOG0189, VOG4688, VOG6623, VOG4693, VOG9741, VOG0152, VOG3643, VOG0044, VOG2338, VOG0198, VOG0143, VOG0796, VOG4544, VOG0691, VOG0692, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG5587, VOG5601, VOG10044, VOG0701, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017, VOG0703, VOG4918 |
Phigaro v2.4.0 (Database: Jan. 2024 release)