Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNKNCMGG_31 | 115115 | 114411 | WalR | 1.31e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FNKNCMGG_64 | 87124 | 86927 | CspR | 1.85e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FNKNCMGG_80 | 2685 | 3746 | repUS74 | 1062 / 1062 | 99.81 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FNKNCMGG_1 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_3 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_4 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_5 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_6 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_7 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_9 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_10 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_11 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_12 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_13 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_14 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_15 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_16 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_17 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_18 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_19 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_20 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_21 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_22 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_23 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_24 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_25 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_26 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_27 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_28 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_29 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_30 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_31 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_32 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_33 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_34 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_35 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_36 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_37 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_38 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_39 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_40 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_41 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_42 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_43 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_44 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_45 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_46 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_47 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_48 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_49 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_50 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_51 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_52 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_53 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_54 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_55 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_56 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_57 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_58 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_59 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_60 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_61 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_62 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_63 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_64 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_65 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_66 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_67 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_68 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_69 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_70 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_71 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_72 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_73 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_74 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_75 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_76 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_77 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_78 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_79 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_80 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_81 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_82 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_83 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_84 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_85 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_86 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_87 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_88 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_89 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_90 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_91 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_93 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_94 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_95 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_96 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_97 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_98 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_99 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_100 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_101 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_102 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_103 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_104 | 1.0 | 0.0 | 1.0 |
| FNKNCMGG_105 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_106 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_107 | 0.0 | 1.0 | 0.0 |
| FNKNCMGG_108 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FNKNCMGG_18 | 37162 | 49624 | False | Siphoviridae | VOG6428, VOG0226, VOG4841, VOG0195, VOG4581, VOG1886, VOG0202, VOG4556, VOG4568, VOG0205, VOG0207, VOG4586 |
| FNKNCMGG_20 | 183873 | 190585 | False | Myoviridae | VOG0275, VOG9667, VOG9859, VOG4918, VOG0703, VOG0753, VOG7896 |
| FNKNCMGG_42 | 1451 | 20155 | False | Siphoviridae | VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG5793, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637, VOG0054 |
Phigaro v2.4.0 (Database: Jan. 2024 release)