Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PPOANHPM_2 | 22996 | 22292 | WalR | 6.53e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| PPOANHPM_26 | 14106 | 14303 | CspR | 3.46e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PPOANHPM_1 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_2 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_3 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_4 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_5 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_6 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_7 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_8 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_9 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_10 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_11 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_12 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_13 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_14 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_15 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_16 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_17 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_18 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_19 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_20 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_21 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_22 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_23 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_24 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_25 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_26 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_27 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_28 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_29 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_30 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_31 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_32 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_33 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_34 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_35 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_36 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_37 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_38 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_39 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_40 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_41 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_42 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_43 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_44 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_45 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_46 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_47 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_48 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_49 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_50 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_51 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_52 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_53 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_54 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_55 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_56 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_57 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_58 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_59 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_61 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_62 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_63 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_65 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_66 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_67 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_68 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_70 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_71 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_72 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_73 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_74 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_75 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_76 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_77 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_78 | 1.0 | 0.0 | 1.0 |
| PPOANHPM_80 | 0.0 | 1.0 | 0.0 |
| PPOANHPM_81 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PPOANHPM_5 | 51370 | 75164 | False | Siphoviridae | VOG4649, VOG0054, VOG1637, VOG7896, VOG6455, VOG4599, VOG4605, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG10303, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG1345, VOG4549, VOG5821 |
| PPOANHPM_6 | 56596 | 66638 | False | Siphoviridae | VOG6914, VOG0862, VOG8520, VOG5353, VOG4552, VOG10059, VOG6428, VOG0181, VOG10867, VOG3642, VOG4799, VOG0025, VOG7735, VOG4813, VOG9759, VOG2820, VOG3643 |
| PPOANHPM_8 | 54578 | 63270 | False | Unknown | VOG0186, VOG0189, VOG6237, VOG9860, VOG0536, VOG9741, VOG4567, VOG0152, VOG3643, VOG1298, VOG9281, VOG3307 |
| PPOANHPM_14 | 2783 | 12725 | False | Siphoviridae | VOG6579, VOG0198, VOG1563, VOG3307, VOG9280, VOG5278, VOG3643, VOG6108, VOG4567, VOG9741, VOG4693, VOG9860, VOG7018, VOG0189, VOG4855, VOG0186, VOG1309 |
| PPOANHPM_22 | 872 | 24074 | False | Siphoviridae | VOG0637, VOG4555, VOG0694, VOG1322, VOG4713, VOG1320, VOG9583, VOG1321, VOG0799, VOG0725, VOG1323, VOG0801, VOG4619, VOG4856, VOG0861, VOG7017, VOG0602, VOG4649, VOG6083 |
Phigaro v2.4.0 (Database: Jan. 2024 release)