Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KJALCODI_56 | 24149 | 23952 | CspA | 6.23e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| KJALCODI_56 | 24149 | 23955 | CspR | 5.30e-28 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KJALCODI_1 | 1.0 | 0.0 | 1.0 |
| KJALCODI_2 | 1.0 | 0.0 | 1.0 |
| KJALCODI_3 | 1.0 | 0.0 | 1.0 |
| KJALCODI_4 | 0.0 | 1.0 | 0.0 |
| KJALCODI_5 | 1.0 | 0.0 | 1.0 |
| KJALCODI_6 | 1.0 | 0.0 | 1.0 |
| KJALCODI_7 | 1.0 | 0.0 | 1.0 |
| KJALCODI_8 | 1.0 | 0.0 | 1.0 |
| KJALCODI_9 | 0.0 | 1.0 | 0.0 |
| KJALCODI_10 | 1.0 | 0.0 | 1.0 |
| KJALCODI_11 | 1.0 | 0.0 | 1.0 |
| KJALCODI_12 | 1.0 | 0.0 | 1.0 |
| KJALCODI_13 | 1.0 | 0.0 | 1.0 |
| KJALCODI_14 | 1.0 | 0.0 | 1.0 |
| KJALCODI_15 | 1.0 | 0.0 | 1.0 |
| KJALCODI_16 | 0.0 | 1.0 | 0.0 |
| KJALCODI_17 | 1.0 | 0.0 | 1.0 |
| KJALCODI_18 | 0.0 | 1.0 | 0.0 |
| KJALCODI_26 | 0.0 | 1.0 | 0.0 |
| KJALCODI_35 | 0.0 | 1.0 | 0.0 |
| KJALCODI_40 | 0.0 | 1.0 | 0.0 |
| KJALCODI_41 | 0.0 | 1.0 | 0.0 |
| KJALCODI_42 | 0.0 | 1.0 | 0.0 |
| KJALCODI_43 | 0.0 | 1.0 | 0.0 |
| KJALCODI_44 | 0.0 | 1.0 | 0.0 |
| KJALCODI_45 | 0.0 | 1.0 | 0.0 |
| KJALCODI_46 | 0.0 | 1.0 | 0.0 |
| KJALCODI_47 | 0.0 | 1.0 | 0.0 |
| KJALCODI_48 | 0.0 | 1.0 | 0.0 |
| KJALCODI_49 | 0.0 | 1.0 | 0.0 |
| KJALCODI_50 | 0.0 | 1.0 | 0.0 |
| KJALCODI_51 | 0.0 | 1.0 | 0.0 |
| KJALCODI_52 | 0.0 | 1.0 | 0.0 |
| KJALCODI_53 | 0.0 | 1.0 | 0.0 |
| KJALCODI_54 | 0.0 | 1.0 | 0.0 |
| KJALCODI_55 | 0.0 | 1.0 | 0.0 |
| KJALCODI_56 | 0.0 | 1.0 | 0.0 |
| KJALCODI_57 | 0.0 | 1.0 | 0.0 |
| KJALCODI_58 | 0.0 | 1.0 | 0.0 |
| KJALCODI_59 | 0.0 | 1.0 | 0.0 |
| KJALCODI_60 | 0.0 | 1.0 | 0.0 |
| KJALCODI_61 | 0.0 | 1.0 | 0.0 |
| KJALCODI_62 | 0.0 | 1.0 | 0.0 |
| KJALCODI_63 | 0.0 | 1.0 | 0.0 |
| KJALCODI_64 | 0.0 | 1.0 | 0.0 |
| KJALCODI_65 | 0.0 | 1.0 | 0.0 |
| KJALCODI_66 | 0.0 | 1.0 | 0.0 |
| KJALCODI_67 | 0.0 | 1.0 | 0.0 |
| KJALCODI_68 | 0.0 | 1.0 | 0.0 |
| KJALCODI_69 | 0.0 | 1.0 | 0.0 |
| KJALCODI_70 | 0.0 | 1.0 | 0.0 |
| KJALCODI_71 | 0.0 | 1.0 | 0.0 |
| KJALCODI_72 | 0.0 | 1.0 | 0.0 |
| KJALCODI_73 | 0.0 | 1.0 | 0.0 |
| KJALCODI_74 | 0.0 | 1.0 | 0.0 |
| KJALCODI_75 | 0.0 | 1.0 | 0.0 |
| KJALCODI_76 | 0.0 | 1.0 | 0.0 |
| KJALCODI_77 | 0.0 | 1.0 | 0.0 |
| KJALCODI_78 | 0.0 | 1.0 | 0.0 |
| KJALCODI_79 | 0.0 | 1.0 | 0.0 |
| KJALCODI_80 | 0.0 | 1.0 | 0.0 |
| KJALCODI_81 | 0.0 | 1.0 | 0.0 |
| KJALCODI_82 | 0.0 | 1.0 | 0.0 |
| KJALCODI_83 | 0.0 | 1.0 | 0.0 |
| KJALCODI_84 | 0.0 | 1.0 | 0.0 |
| KJALCODI_85 | 1.0 | 0.0 | 1.0 |
| KJALCODI_86 | 0.0 | 1.0 | 0.0 |
| KJALCODI_87 | 0.0 | 1.0 | 0.0 |
| KJALCODI_88 | 0.0 | 1.0 | 0.0 |
| KJALCODI_89 | 0.0 | 1.0 | 0.0 |
| KJALCODI_90 | 0.0 | 1.0 | 0.0 |
| KJALCODI_91 | 0.0 | 1.0 | 0.0 |
| KJALCODI_92 | 0.0 | 1.0 | 0.0 |
| KJALCODI_93 | 1.0 | 0.0 | 1.0 |
| KJALCODI_94 | 0.0 | 1.0 | 0.0 |
| KJALCODI_95 | 0.0 | 1.0 | 0.0 |
| KJALCODI_96 | 0.0 | 1.0 | 0.0 |
| KJALCODI_97 | 0.0 | 1.0 | 0.0 |
| KJALCODI_98 | 0.0 | 1.0 | 0.0 |
| KJALCODI_99 | 0.0 | 1.0 | 0.0 |
| KJALCODI_100 | 0.0 | 1.0 | 0.0 |
| KJALCODI_101 | 0.0 | 1.0 | 0.0 |
| KJALCODI_102 | 0.0 | 1.0 | 0.0 |
| KJALCODI_103 | 0.0 | 1.0 | 0.0 |
| KJALCODI_104 | 0.0 | 1.0 | 0.0 |
| KJALCODI_105 | 0.0 | 1.0 | 0.0 |
| KJALCODI_106 | 0.0 | 1.0 | 0.0 |
| KJALCODI_107 | 0.0 | 1.0 | 0.0 |
| KJALCODI_108 | 0.0 | 1.0 | 0.0 |
| KJALCODI_109 | 1.0 | 0.0 | 1.0 |
| KJALCODI_110 | 1.0 | 0.0 | 1.0 |
| KJALCODI_111 | 0.0 | 1.0 | 0.0 |
| KJALCODI_112 | 0.0 | 1.0 | 0.0 |
| KJALCODI_113 | 1.0 | 0.0 | 1.0 |
| KJALCODI_114 | 1.0 | 0.0 | 1.0 |
| KJALCODI_115 | 1.0 | 0.0 | 1.0 |
| KJALCODI_116 | 0.0 | 1.0 | 0.0 |
| KJALCODI_118 | 1.0 | 0.0 | 1.0 |
| KJALCODI_119 | 0.0 | 1.0 | 0.0 |
| KJALCODI_120 | 1.0 | 0.0 | 1.0 |
| KJALCODI_121 | 0.0 | 1.0 | 0.0 |
| KJALCODI_122 | 0.0 | 1.0 | 0.0 |
| KJALCODI_123 | 1.0 | 0.0 | 1.0 |
| KJALCODI_124 | 1.0 | 0.0 | 1.0 |
| KJALCODI_125 | 1.0 | 0.0 | 1.0 |
| KJALCODI_126 | 1.0 | 0.0 | 1.0 |
| KJALCODI_127 | 1.0 | 0.0 | 1.0 |
| KJALCODI_128 | 1.0 | 0.0 | 1.0 |
| KJALCODI_129 | 1.0 | 0.0 | 1.0 |
| KJALCODI_131 | 1.0 | 0.0 | 1.0 |
| KJALCODI_132 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KJALCODI_54 | 8459 | 27700 | False | Siphoviridae | VOG6422, VOG0641, VOG0648, VOG4599, VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG1300, VOG4564, VOG0720, VOG10227 |
| KJALCODI_64 | 1198 | 18070 | False | Siphoviridae | VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4581, VOG4571, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641 |
| KJALCODI_100 | 46151 | 54190 | False | Siphoviridae | VOG0275, VOG4585, VOG1159, VOG4677 |
Phigaro v2.4.0 (Database: Jan. 2024 release)