Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EIGOLAPF_65 | 16728 | 17432 | WalR | 1.90e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| EIGOLAPF_61 | 32315 | 32118 | CspR | 4.72e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EIGOLAPF_49 | 36010 | 37071 | repUS74 | 1064 / 1062 | 92.76 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EIGOLAPF_1 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_2 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_3 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_4 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_5 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_6 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_7 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_8 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_9 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_10 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_11 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_12 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_22 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_33 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_37 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_38 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_39 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_40 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_41 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_42 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_43 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_44 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_45 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_46 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_47 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_48 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_49 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_50 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_51 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_52 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_53 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_54 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_55 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_56 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_57 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_58 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_59 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_60 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_61 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_62 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_63 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_64 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_65 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_66 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_67 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_68 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_69 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_70 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_71 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_72 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_73 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_74 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_75 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_76 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_77 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_78 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_79 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_80 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_81 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_82 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_83 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_84 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_85 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_86 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_87 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_88 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_89 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_90 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_91 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_92 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_93 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_94 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_95 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_96 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_97 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_98 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_99 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_100 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_101 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_102 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_103 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_104 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_105 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_106 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_107 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_108 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_109 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_110 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_111 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_112 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_114 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_115 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_116 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_117 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_118 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_119 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_120 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_121 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_122 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_123 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_124 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_125 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_126 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_127 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_128 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_129 | 1.0 | 0.0 | 1.0 |
| EIGOLAPF_130 | 0.0 | 1.0 | 0.0 |
| EIGOLAPF_132 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EIGOLAPF_52 | 3 | 35944 | False | Siphoviridae | VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG0531, VOG10904, VOG4570, VOG6579, VOG0198, VOG6303, VOG3643, VOG3643, VOG0152, VOG4643, VOG0275, VOG0195, VOG9741, VOG0536, VOG9860, VOG7018, VOG4688, VOG0189, VOG4566, VOG0226, VOG0514, VOG0283, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG5821, VOG4552, VOG6463, VOG7581 |
| EIGOLAPF_61 | 5611 | 10254 | False | Unknown | VOG4693, VOG6623, VOG0189, VOG4566, VOG0186, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)