Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NIOJGLHM_87 | 28810 | 29514 | WalR | 6.85e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NIOJGLHM_77 | 28394 | 28197 | CspR | 2.34e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NIOJGLHM_1 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_2 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_3 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_4 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_5 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_6 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_7 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_8 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_9 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_10 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_11 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_12 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_13 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_14 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_15 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_16 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_17 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_18 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_19 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_20 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_21 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_22 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_24 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_25 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_26 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_27 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_28 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_29 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_30 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_31 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_32 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_33 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_34 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_35 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_36 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_37 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_38 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_39 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_40 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_41 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_42 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_43 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_44 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_45 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_46 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_47 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_49 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_50 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_51 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_52 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_53 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_54 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_55 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_56 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_57 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_58 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_59 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_60 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_62 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_63 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_64 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_65 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_66 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_67 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_68 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_69 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_70 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_71 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_72 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_73 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_74 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_75 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_76 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_77 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_78 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_79 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_80 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_81 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_82 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_83 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_84 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_85 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_86 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_87 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_88 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_89 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_90 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_91 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_92 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_93 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_94 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_95 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_96 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_97 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_98 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_99 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_100 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_101 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_102 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_103 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_104 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_105 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_106 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_107 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_108 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_109 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_110 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_111 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_112 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_113 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_114 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_115 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_116 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_117 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_118 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_119 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_120 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_121 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_122 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_123 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_124 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_125 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_126 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_127 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_128 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_129 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_130 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_131 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_132 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_133 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_134 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_135 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_136 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_137 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_138 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_139 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_140 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_141 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_142 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_143 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_144 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_145 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_146 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_147 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_148 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_149 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_150 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_151 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_152 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_153 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_154 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_155 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_156 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_157 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_158 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_159 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_160 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_161 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_162 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_163 | 1.0 | 0.0 | 1.0 |
| NIOJGLHM_164 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_165 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_166 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_167 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_168 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_169 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_170 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_171 | 0.0 | 1.0 | 0.0 |
| NIOJGLHM_172 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NIOJGLHM_77 | 667 | 7173 | False | Unknown | VOG4994, VOG0152, VOG4237, VOG9741, VOG0536, VOG9860, VOG0226, VOG4566, VOG0186, VOG1309 |
| NIOJGLHM_102 | 4740 | 14256 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)