Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HNCKCBKI_114 | 9680 | 8976 | WalR | 5.72e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| HNCKCBKI_112 | 28394 | 28197 | CspR | 1.92e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HNCKCBKI_1 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_2 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_3 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_4 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_5 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_6 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_7 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_8 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_9 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_10 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_11 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_12 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_13 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_14 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_15 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_16 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_17 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_18 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_19 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_20 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_21 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_22 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_23 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_24 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_25 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_26 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_27 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_28 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_29 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_30 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_31 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_32 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_33 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_34 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_35 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_36 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_37 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_38 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_39 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_40 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_41 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_42 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_43 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_44 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_45 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_46 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_48 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_49 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_50 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_51 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_52 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_53 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_54 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_55 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_56 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_57 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_58 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_59 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_60 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_61 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_62 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_63 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_64 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_65 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_66 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_67 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_68 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_69 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_70 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_71 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_72 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_73 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_75 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_76 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_77 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_78 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_79 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_80 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_81 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_82 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_83 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_84 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_85 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_86 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_87 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_88 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_89 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_90 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_91 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_92 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_93 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_94 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_95 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_96 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_97 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_98 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_99 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_100 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_101 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_102 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_103 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_104 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_105 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_106 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_107 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_108 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_109 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_110 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_111 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_112 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_113 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_114 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_115 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_116 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_117 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_118 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_119 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_120 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_121 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_122 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_123 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_124 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_125 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_126 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_127 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_128 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_129 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_130 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_131 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_132 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_133 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_134 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_135 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_136 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_137 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_138 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_139 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_140 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_141 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_142 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_143 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_144 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_145 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_146 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_147 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_148 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_149 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_150 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_151 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_152 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_153 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_154 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_155 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_156 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_157 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_158 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_159 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_160 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_161 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_162 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_163 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_164 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_165 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_166 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_167 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_168 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_169 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_170 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_171 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_172 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_173 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_174 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_175 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_176 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_177 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_178 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_179 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_180 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_181 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_182 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_183 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_184 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_185 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_186 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_187 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_188 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_189 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_190 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_191 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_192 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_193 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_194 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_195 | 0.0 | 1.0 | 0.0 |
| HNCKCBKI_196 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_197 | 1.0 | 0.0 | 1.0 |
| HNCKCBKI_198 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HNCKCBKI_112 | 667 | 7700 | False | Unknown | VOG4994, VOG0152, VOG4237, VOG9741, VOG0536, VOG9860, VOG0226, VOG4566, VOG0186, VOG1309, VOG8241 |
Phigaro v2.4.0 (Database: Jan. 2024 release)