Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DKPPGMJO_55 | 42439 | 41735 | WalR | 1.16e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| DKPPGMJO_72 | 17165 | 17362 | CspR | 1.71e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DKPPGMJO_1 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_2 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_3 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_4 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_5 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_6 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_7 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_8 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_9 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_10 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_11 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_12 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_13 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_14 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_15 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_16 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_17 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_18 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_19 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_20 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_22 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_23 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_24 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_25 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_26 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_27 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_28 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_29 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_30 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_31 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_32 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_33 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_34 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_35 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_36 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_37 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_38 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_39 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_41 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_42 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_43 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_44 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_45 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_46 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_47 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_48 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_49 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_50 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_51 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_52 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_53 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_54 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_55 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_56 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_57 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_58 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_59 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_60 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_61 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_62 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_63 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_64 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_65 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_66 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_67 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_68 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_69 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_70 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_71 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_72 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_73 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_74 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_75 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_76 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_77 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_78 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_79 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_80 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_81 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_82 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_83 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_84 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_85 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_86 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_87 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_88 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_89 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_90 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_91 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_92 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_93 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_94 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_95 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_96 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_97 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_98 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_99 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_100 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_101 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_102 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_103 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_104 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_105 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_106 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_107 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_108 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_109 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_110 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_111 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_112 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_113 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_114 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_115 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_116 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_117 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_118 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_119 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_120 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_121 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_122 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_123 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_124 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_125 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_126 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_127 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_128 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_129 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_130 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_131 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_132 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_133 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_134 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_135 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_136 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_137 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_138 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_139 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_140 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_141 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_142 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_143 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_144 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_145 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_146 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_147 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_148 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_149 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_150 | 0.0 | 1.0 | 0.0 |
| DKPPGMJO_151 | 1.0 | 0.0 | 1.0 |
| DKPPGMJO_152 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DKPPGMJO_33 | 51162 | 60678 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)