Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JPOBGBBC_79 | 22534 | 23238 | WalR | 5.72e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| JPOBGBBC_71 | 28394 | 28197 | CspR | 2.34e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JPOBGBBC_1 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_2 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_3 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_4 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_5 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_6 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_7 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_8 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_9 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_10 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_11 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_12 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_13 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_14 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_15 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_16 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_18 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_19 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_20 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_21 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_22 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_23 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_24 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_25 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_26 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_27 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_28 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_29 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_30 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_31 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_32 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_33 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_34 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_35 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_36 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_37 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_38 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_39 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_41 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_42 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_43 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_44 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_45 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_46 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_47 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_48 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_49 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_50 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_51 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_52 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_53 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_54 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_55 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_56 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_57 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_58 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_59 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_60 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_61 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_62 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_63 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_64 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_65 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_66 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_67 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_68 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_69 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_70 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_71 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_72 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_73 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_74 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_75 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_76 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_77 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_78 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_79 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_80 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_81 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_82 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_83 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_84 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_85 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_86 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_87 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_88 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_89 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_90 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_91 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_92 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_93 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_94 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_95 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_96 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_97 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_98 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_99 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_100 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_101 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_102 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_103 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_104 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_105 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_106 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_107 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_108 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_109 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_110 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_111 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_112 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_113 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_114 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_115 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_116 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_117 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_118 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_119 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_120 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_121 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_122 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_123 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_124 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_125 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_126 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_127 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_128 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_129 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_130 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_131 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_132 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_133 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_134 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_135 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_136 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_137 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_138 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_139 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_140 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_141 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_142 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_143 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_144 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_145 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_146 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_147 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_148 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_149 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_150 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_151 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_152 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_153 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_154 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_155 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_156 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_157 | 1.0 | 0.0 | 1.0 |
| JPOBGBBC_158 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_159 | 0.0 | 1.0 | 0.0 |
| JPOBGBBC_160 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JPOBGBBC_71 | 667 | 7173 | False | Unknown | VOG4994, VOG0152, VOG4237, VOG9741, VOG0536, VOG9860, VOG0226, VOG4566, VOG0186, VOG1309 |
| JPOBGBBC_89 | 9617 | 19133 | False | Siphoviridae | VOG4606, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
| JPOBGBBC_127 | 136 | 7124 | False | Siphoviridae | VOG0025, VOG4799, VOG0226, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG4552, VOG4995 |
Phigaro v2.4.0 (Database: Jan. 2024 release)