Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DHDEFLCF_4 | 27024 | 26320 | WalR | 6.85e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| DHDEFLCF_5 | 77276 | 77079 | CspR | 3.20e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DHDEFLCF_1 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_2 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_3 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_4 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_5 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_6 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_7 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_8 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_9 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_10 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_11 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_12 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_13 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_14 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_15 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_16 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_17 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_18 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_19 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_20 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_21 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_22 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_23 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_24 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_25 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_26 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_27 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_28 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_29 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_30 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_31 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_32 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_33 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_34 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_35 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_36 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_37 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_38 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_39 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_40 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_41 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_42 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_43 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_44 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_45 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_46 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_47 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_48 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_49 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_50 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_51 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_52 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_53 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_54 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_55 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_56 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_57 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_58 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_59 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_60 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_61 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_62 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_63 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_64 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_65 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_66 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_67 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_68 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_69 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_70 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_71 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_72 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_73 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_74 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_75 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_76 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_77 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_78 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_79 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_80 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_81 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_82 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_83 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_84 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_85 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_86 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_87 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_88 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_89 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_90 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_91 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_92 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_93 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_94 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_95 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_96 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_97 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_98 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_99 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_100 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_101 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_102 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_103 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_104 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_105 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_106 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_107 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_108 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_109 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_110 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_111 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_112 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_113 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_114 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_115 | 0.0 | 1.0 | 0.0 |
| DHDEFLCF_116 | 1.0 | 0.0 | 1.0 |
| DHDEFLCF_117 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DHDEFLCF_1 | 57818 | 63953 | False | Unknown | VOG9667, VOG6495, VOG2338, VOG1309, VOG0186, VOG4855, VOG0189 |
| DHDEFLCF_1 | 69616 | 104615 | False | Siphoviridae | VOG4570, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG0694, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4649, VOG8155, VOG6083, VOG1246, VOG7373 |
Phigaro v2.4.0 (Database: Jan. 2024 release)