Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MENDNHPA_6 | 66947 | 67651 | WalR | 6.85e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MENDNHPA_10 | 5962 | 6159 | CspR | 2.45e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MENDNHPA_1 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_2 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_3 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_4 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_5 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_6 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_7 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_8 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_9 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_10 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_11 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_12 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_13 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_14 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_15 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_16 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_17 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_18 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_19 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_20 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_21 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_22 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_23 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_24 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_25 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_26 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_27 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_28 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_29 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_30 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_31 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_32 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_33 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_34 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_35 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_36 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_37 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_38 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_39 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_40 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_41 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_42 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_43 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_44 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_45 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_46 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_47 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_48 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_49 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_50 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_51 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_52 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_53 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_54 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_55 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_56 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_57 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_58 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_59 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_60 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_61 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_62 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_63 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_64 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_65 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_66 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_67 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_68 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_69 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_70 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_71 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_72 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_73 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_74 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_75 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_76 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_77 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_78 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_79 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_80 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_81 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_82 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_83 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_84 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_85 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_86 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_87 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_88 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_89 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_90 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_91 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_92 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_93 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_94 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_95 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_96 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_97 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_98 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_99 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_100 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_101 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_102 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_103 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_104 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_105 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_106 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_107 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_108 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_109 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_110 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_112 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_113 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_115 | 1.0 | 0.0 | 1.0 |
| MENDNHPA_116 | 0.0 | 1.0 | 0.0 |
| MENDNHPA_117 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MENDNHPA_1 | 57757 | 63892 | False | Unknown | VOG9667, VOG6495, VOG2338, VOG1309, VOG0186, VOG4855, VOG0189 |
| MENDNHPA_1 | 69555 | 104554 | False | Siphoviridae | VOG4570, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG0694, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4649, VOG8155, VOG6083, VOG1246, VOG7373 |
Phigaro v2.4.0 (Database: Jan. 2024 release)