Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LANDKDAI_3 | 66958 | 67662 | WalR | 5.49e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| LANDKDAI_52 | 8787 | 8590 | CspR | 5.64e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| LANDKDAI_116 | 564 | 1123 | rep38 | 561 / 903 | 90.02 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LANDKDAI_1 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_2 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_3 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_4 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_5 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_6 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_7 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_8 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_9 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_10 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_11 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_12 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_13 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_14 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_15 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_16 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_17 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_18 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_19 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_20 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_21 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_22 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_23 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_24 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_25 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_26 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_27 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_28 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_29 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_30 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_31 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_32 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_33 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_34 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_35 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_36 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_37 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_38 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_39 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_40 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_41 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_42 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_43 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_44 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_45 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_46 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_47 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_48 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_49 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_50 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_51 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_52 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_53 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_54 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_55 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_56 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_57 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_58 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_59 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_60 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_61 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_62 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_63 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_64 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_65 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_66 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_67 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_68 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_69 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_70 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_71 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_72 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_73 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_74 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_75 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_76 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_77 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_78 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_79 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_80 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_81 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_82 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_83 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_84 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_85 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_86 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_87 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_88 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_89 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_90 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_91 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_92 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_93 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_94 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_95 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_96 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_97 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_98 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_99 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_100 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_101 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_102 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_103 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_104 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_105 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_106 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_107 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_108 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_109 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_110 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_111 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_112 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_113 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_114 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_115 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_116 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_117 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_118 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_119 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_120 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_121 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_122 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_123 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_124 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_125 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_126 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_127 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_128 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_129 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_130 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_131 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_132 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_133 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_134 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_135 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_136 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_137 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_138 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_139 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_140 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_141 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_142 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_143 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_144 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_145 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_146 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_147 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_148 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_149 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_150 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_151 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_152 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_153 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_154 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_155 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_156 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_157 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_158 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_159 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_160 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_161 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_162 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_163 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_164 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_166 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_167 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_168 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_169 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_170 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_171 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_172 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_173 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_174 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_175 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_176 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_177 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_178 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_179 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_180 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_181 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_182 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_183 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_184 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_185 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_186 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_188 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_189 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_190 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_191 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_192 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_193 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_195 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_196 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_197 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_198 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_199 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_200 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_202 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_203 | 1.0 | 0.0 | 1.0 |
| LANDKDAI_204 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_205 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_206 | 0.0 | 1.0 | 0.0 |
| LANDKDAI_207 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LANDKDAI_1 | 57808 | 63943 | False | Unknown | VOG9667, VOG6495, VOG2338, VOG1309, VOG0186, VOG4855, VOG0189 |
| LANDKDAI_1 | 69606 | 104605 | False | Siphoviridae | VOG4570, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG0694, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4649, VOG8155, VOG6083, VOG1246, VOG7373 |
Phigaro v2.4.0 (Database: Jan. 2024 release)